RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 RPS13P62277 151 aaKnown RBP7.42□□□□□ -1.22
VIM-202ENST00000421459 POU4F1Q01851 419 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 LTBQ06643 244 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 FOXF2Q12947 444 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 LAPTM5Q13571 262 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 NTRK2Q16620 822 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 DEFB113Q30KQ7 82 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 WIPI1Q5MNZ9 446 aaPredicted RBP7.42□□□□□ -1.22
VIM-202ENST00000421459 DEPDC1Q5TB30 811 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 KHDRBS2Q5VWX1 349 aaKnown RBP7.42□□□□□ -1.22
VIM-202ENST00000421459 FBXW10Q5XX13 1052 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 TMEM198Q66K66 360 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 MED27Q6P2C8 311 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 PAMR1Q6UXH9 720 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 CMC1Q7Z7K0 106 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 GPR180Q86V85 440 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 KRTAP1-3Q8IUG1 177 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 LAS2Q8IYD9 372 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 PDPRQ8NCN5 879 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 HUS1BQ8NHY5 278 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 FAM222BQ8WU58 562 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 DIO2Q92813 273 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 LRRC39Q96DD0 335 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 RBM18Q96H35 190 aaKnown RBP7.42□□□□□ -1.22
VIM-202ENST00000421459 FBXL20Q96IG2 436 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 RILPQ96NA2 401 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 ZNF717Q9BY31 904 aaPredicted RBP7.42□□□□□ -1.22
VIM-202ENST00000421459 ROGDIQ9GZN7 287 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 PITHD1Q9GZP4 211 aaPredicted RBP7.42□□□□□ -1.22
VIM-202ENST00000421459 PLEKHF2Q9H8W4 249 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 CNOT10Q9H9A5 744 aaKnown RBP7.42□□□□□ -1.22
VIM-202ENST00000421459 POPDC3Q9HBV1 291 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 B4GALT7Q9UBV7 327 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 BOKQ9UMX3 212 aaPredicted RBP7.42□□□□□ -1.22
VIM-202ENST00000421459 CAMK2AQ9UQM7 478 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 ASB4Q9Y574 426 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 SPACA6W5XKT8 324 aa7.42□□□□□ -1.22
VIM-202ENST00000421459 TUBAL3A6NHL2 446 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 EFCAB8A8MWE9 144 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 AHRRA9YTQ3 701 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 SUPT3HB4E1H0 165 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 EEF1E1-BLOC1S5C9J1V9 151 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 DVL2O14641 736 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 EEF1E1O43324 174 aaKnown RBP7.41□□□□□ -1.22
VIM-202ENST00000421459 OR10H2O60403 315 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 SUPT3HO75486 399 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 GPR75O95800 540 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 AIFM1O95831 613 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 RAF1P04049 648 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 EPXP11678 715 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 STMN1P16949 149 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 BMP7P18075 431 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 SERPINB3P29508 390 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 HPDP32754 393 aaPredicted RBP7.41□□□□□ -1.22
VIM-202ENST00000421459 BSGP35613 385 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 PIK3CGP48736 1102 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 RAP1GDS1P52306 607 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 NAGLUP54802 743 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 GPX6P59796 221 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 IRF9Q00978 393 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 PLIN5Q00G26 463 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 TNFRSF17Q02223 184 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 KEAP1Q14145 624 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 E2F2Q14209 437 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 DAZAP2Q15038 168 aaPredicted RBP7.41□□□□□ -1.22
VIM-202ENST00000421459 TOMM20Q15388 145 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 TBCCQ15814 346 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 TMEM35AQ53FP2 167 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 PAGE2BQ5JRK9 111 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 MRM1Q6IN84 353 aaKnown RBP7.41□□□□□ -1.22
VIM-202ENST00000421459 RNF111Q6ZNA4 994 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 SLC29A4Q7RTT9 530 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 LUZP2Q86TE4 346 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 ISCA2Q86U28 154 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 YRDCQ86U90 279 aaKnown RBP7.41□□□□□ -1.22
VIM-202ENST00000421459 MYLK4Q86YV6 388 aaPredicted RBP7.41□□□□□ -1.22
VIM-202ENST00000421459 CREG2Q8IUH2 290 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 ST13P4Q8IZP2 240 aaPredicted RBP7.41□□□□□ -1.22
VIM-202ENST00000421459 TCAIMQ8N3R3 496 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 SLC15A4Q8N697 577 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 TEX9Q8N6V9 391 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 ZNF441Q8N8Z8 693 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 C9orf106Q8NAJ2 232 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 SIMC1Q8NDZ2 872 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 SRFBP1Q8NEF9 429 aaKnown RBP7.41□□□□□ -1.22
VIM-202ENST00000421459 SPPL2AQ8TCT8 520 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 SLC44A1Q8WWI5 657 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 ANP32BQ92688 251 aaKnown RBP7.41□□□□□ -1.22
VIM-202ENST00000421459 TANKQ92844 425 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 RIT1Q92963 219 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 RGMAQ96B86 450 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 CMTM7Q96FZ5 175 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 WDYHV1Q96HA8 205 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 UBXN10Q96LJ8 280 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 ALPK1Q96QP1 1244 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 GPR22Q99680 433 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 RBBP8Q99708 897 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 UGT2B28Q9BY64 529 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 DPH5Q9H2P9 285 aa7.41□□□□□ -1.22
VIM-202ENST00000421459 SAYSD1Q9NPB0 183 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms