RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 MBD3L2Q8NHZ7 208 aaPredicted RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 UCN3Q969E3 161 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 RBM18Q96H35 190 aaKnown RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 GNRHR2Q96P88 292 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 DGAT2Q96PD7 388 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 DOHHQ9BU89 302 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 EFCAB11Q9BUY7 163 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 UGT2B28Q9BY64 529 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 ROGDIQ9GZN7 287 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 DERL2Q9GZP9 239 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 WWTR1Q9GZV5 400 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 PTBP2Q9UKA9 531 aaKnown RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 SAP18O00422 153 aaKnown RBP13.01□□□□□ -0.33
NFE4-201ENST00000420058 CLGNO14967 610 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 STK16O75716 305 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 PIAS1O75925 651 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 IL18BPO95998 194 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 COX7A2P14406 83 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 GDF1P27539 372 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 MSH2P43246 934 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 HNRNPH2P55795 449 aaKnown RBP13.01□□□□□ -0.33
NFE4-201ENST00000420058 HERVK_113P63132 956 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 ERVK-8P63133 956 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 TGM3Q08188 693 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 MGAT5Q09328 741 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 CHIT1Q13231 466 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 SLAMF1Q13291 335 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 POU4F3Q15319 338 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 PCBP2Q15366 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
NFE4-201ENST00000420058 OR4D1Q15615 310 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 TMEM35AQ53FP2 167 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 EIPR1Q53HC9 387 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 CDKL4Q5MAI5 379 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 DEPDC1Q5TB30 811 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 SHEQ5VZ18 495 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 SYDE1Q6ZW31 735 aaPredicted RBP13.01□□□□□ -0.33
NFE4-201ENST00000420058 FRA10AC1Q70Z53 315 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 LAS2Q8IYD9 372 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 SRFBP1Q8NEF9 429 aaKnown RBP13.01□□□□□ -0.33
NFE4-201ENST00000420058 ACTRT1Q8TDG2 376 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 GRK7Q8WTQ7 553 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 LRRC46Q96FV0 321 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 COX4I2Q96KJ9 171 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 ERVK-6Q9BXR3 956 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 ANGPTL4Q9BY76 406 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 OR51B5Q9H339 312 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 RPF2Q9H7B2 306 aaKnown RBP13.01□□□□□ -0.33
NFE4-201ENST00000420058 SMYD2Q9NRG4 433 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 ERVK-19Q9WJR5 959 aa13.01□□□□□ -0.33
NFE4-201ENST00000420058 MTO1Q9Y2Z2 717 aaKnown RBP13.01□□□□□ -0.33
NFE4-201ENST00000420058 A0A1W2PS29 197 aa13□□□□□ -0.33
NFE4-201ENST00000420058 PGRMC1O00264 195 aaKnown RBP13□□□□□ -0.33
NFE4-201ENST00000420058 TRAPPC6AO75865 159 aa13□□□□□ -0.33
NFE4-201ENST00000420058 GOSR1O95249 250 aa13□□□□□ -0.33
NFE4-201ENST00000420058 CD1DP15813 335 aa13□□□□□ -0.33
NFE4-201ENST00000420058 ALOX15P16050 662 aaPredicted RBP13□□□□□ -0.33
NFE4-201ENST00000420058 NAGLUP54802 743 aa13□□□□□ -0.33
NFE4-201ENST00000420058 FBXW4P57775 412 aa13□□□□□ -0.33
NFE4-201ENST00000420058 IRF8Q02556 426 aa13□□□□□ -0.33
NFE4-201ENST00000420058 PCDH1Q08174 1060 aa13□□□□□ -0.33
NFE4-201ENST00000420058 BIKQ13323 160 aa13□□□□□ -0.33
NFE4-201ENST00000420058 ZNF267Q14586 743 aaPredicted RBP13□□□□□ -0.33
NFE4-201ENST00000420058 PPP1R7Q15435 360 aa13□□□□□ -0.33
NFE4-201ENST00000420058 PDK4Q16654 411 aa13□□□□□ -0.33
NFE4-201ENST00000420058 SPRED3Q2MJR0 410 aa13□□□□□ -0.33
NFE4-201ENST00000420058 AP5B1Q2VPB7 878 aa13□□□□□ -0.33
NFE4-201ENST00000420058 OR4C11Q6IEV9 310 aa13□□□□□ -0.33
NFE4-201ENST00000420058 SULT1C3Q6IMI6 304 aa13□□□□□ -0.33
NFE4-201ENST00000420058 GPSM1Q86YR5 675 aa13□□□□□ -0.33
NFE4-201ENST00000420058 ST13P4Q8IZP2 240 aaPredicted RBP13□□□□□ -0.33
NFE4-201ENST00000420058 TCAIMQ8N3R3 496 aa13□□□□□ -0.33
NFE4-201ENST00000420058 SNX31Q8N9S9 440 aa13□□□□□ -0.33
NFE4-201ENST00000420058 C7orf57Q8NEG2 295 aa13□□□□□ -0.33
NFE4-201ENST00000420058 OR7G3Q8NG95 312 aa13□□□□□ -0.33
NFE4-201ENST00000420058 SPPL2AQ8TCT8 520 aa13□□□□□ -0.33
NFE4-201ENST00000420058 DIO2Q92813 273 aa13□□□□□ -0.33
NFE4-201ENST00000420058 TANKQ92844 425 aa13□□□□□ -0.33
NFE4-201ENST00000420058 DACH2Q96NX9 599 aa13□□□□□ -0.33
NFE4-201ENST00000420058 TRIB1Q96RU8 372 aa13□□□□□ -0.33
NFE4-201ENST00000420058 ZNF717Q9BY31 904 aaPredicted RBP13□□□□□ -0.33
NFE4-201ENST00000420058 DDX47Q9H0S4 455 aaKnown RBP13□□□□□ -0.33
NFE4-201ENST00000420058 CAB39LQ9H9S4 337 aa13□□□□□ -0.33
NFE4-201ENST00000420058 CALHM2Q9HA72 323 aa13□□□□□ -0.33
NFE4-201ENST00000420058 POPDC3Q9HBV1 291 aa13□□□□□ -0.33
NFE4-201ENST00000420058 WWOXQ9NZC7 414 aa13□□□□□ -0.33
NFE4-201ENST00000420058 ASIC3Q9UHC3 531 aa13□□□□□ -0.33
NFE4-201ENST00000420058 CAMK2AQ9UQM7 478 aa13□□□□□ -0.33
NFE4-201ENST00000420058 C15orf41Q9Y2V0 281 aa13□□□□□ -0.33
NFE4-201ENST00000420058 JRKLQ9Y4A0 524 aa13□□□□□ -0.33
NFE4-201ENST00000420058 IQANK1A0A1B0GTG1 560 aa12.99□□□□□ -0.33
NFE4-201ENST00000420058 EEF1E1-BLOC1S5C9J1V9 151 aa12.99□□□□□ -0.33
NFE4-201ENST00000420058 SIAH2O43255 324 aa12.99□□□□□ -0.33
NFE4-201ENST00000420058 EEF1E1O43324 174 aaKnown RBP12.99□□□□□ -0.33
NFE4-201ENST00000420058 GPR75O95800 540 aa12.99□□□□□ -0.33
NFE4-201ENST00000420058 OPRM1P35372 400 aa12.99□□□□□ -0.33
NFE4-201ENST00000420058 GMPRP36959 345 aa12.99□□□□□ -0.33
NFE4-201ENST00000420058 CASP3P42574 277 aa12.99□□□□□ -0.33
NFE4-201ENST00000420058 LAPTM5Q13571 262 aa12.99□□□□□ -0.33
NFE4-201ENST00000420058 FASTKD3Q14CZ7 662 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms