RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 OOSP2Q86WS3 158 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 SDR16C5Q8N3Y7 309 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ARHGEF39Q8N4T4 335 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ZNF655Q8N720 491 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 SETD9Q8NE22 299 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 GPR32P1Q8NGA4 272 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 BBS10Q8TAM1 723 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 SPPL2AQ8TCT8 520 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ZDHHC1Q8WTX9 485 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 CLDN23Q96B33 292 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PIP5K1AQ99755 562 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 MACROD1Q9BQ69 325 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 BTBD2Q9BX70 525 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 RSPO3Q9BXY4 272 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 OR51I1Q9H343 314 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ZCCHC3Q9NUD5 404 aaKnown RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 MS4A12Q9NXJ0 267 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PDP1Q9P0J1 537 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 THEGQ9P2T0 379 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 FBXW2Q9UKT8 454 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ACAD8Q9UKU7 415 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PSME2Q9UL46 239 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 DAPP1Q9UN19 280 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PCDHGA8Q9Y5G5 932 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 SLC22A7Q9Y694 548 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 SLCO1B1Q9Y6L6 691 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 COMMD3-BMI1R4GMX3 469 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 U3KQV3 271 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ADAMTS20P59510 1910 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 DSPPQ9NZW4 1301 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 COL5A1P20908 1838 aaPredicted RBP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 XIRP2A4UGR9 3374 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 TRBV23OR9-2A0A075B6M9 112 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 A0A0J9YVX5 310 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 TMEM247A6NEH6 219 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 H0YGG7 62 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 TNFRSF11BO00300 401 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 B3GALT2O43825 422 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 MITFO75030 526 aaPredicted RBP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 SLITRK5O94991 958 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 OR6B1O95007 311 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 IFNW1P05000 195 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 FESP07332 822 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 ANXA8P13928 327 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 CTSEP14091 401 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 JUNDP17535 347 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 ALOX12P18054 663 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 MATN1P21941 496 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 CD38P28907 300 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 RRM2P31350 389 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 TTKP33981 857 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 MPIP34949 423 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 CLK3P49761 638 aaKnown RBP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 RGS19P49795 217 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 CDH15P55291 814 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 LIM2P55344 173 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 NUP107P57740 925 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 CXCR4P61073 352 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 ARF3P61204 181 aaPredicted RBP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 SNRPNP63162 240 aaKnown RBP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 BTN3A2P78410 334 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 PRR5P85299 388 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 TEKQ02763 1124 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 HHEXQ03014 270 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 FUT5Q11128 374 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 GNA13Q14344 377 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 PUM1Q14671 1186 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 TCEA2Q15560 299 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 MICAQ29983 383 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 CTU2Q2VPK5 515 aaKnown RBP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 C6orf141Q5SZD1 244 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 USP53Q70EK8 1073 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 PARP8Q8N3A8 854 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 SPEM1Q8N4L4 309 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 CAMKK1Q8N5S9 505 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 FRMD1Q8N878 549 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 OR10G6Q8NH81 332 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 C1orf216Q8TAB5 229 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 GIPC3Q8TF64 312 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 RAB8BQ92930 207 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 GIMAP5Q96F15 307 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 CNDP2Q96KP4 475 aaKnown RBP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 FCRL4Q96PJ5 515 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 ZNF607Q96SK3 696 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 TSC22D3Q99576 134 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 TUBA1CQ9BQE3 449 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 NPLQ9BXD5 320 aaPredicted RBP8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 TPSD1Q9BZJ3 242 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 YIPF3Q9GZM5 350 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 ING2Q9H160 280 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 SEMA6CQ9H3T2 930 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 RUBCNLQ9H714 662 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 IL21RQ9HBE5 538 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 C3orf14Q9HBI5 128 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 KRT84Q9NSB2 600 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 ACER3Q9NUN7 267 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 HRASLS2Q9NWW9 162 aa8.53□□□□□ -1.04
LINCMD1-201ENST00000418518 PTTG2Q9NZH5 202 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms