RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ACOD1A6NK06 481 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 FBP2O00757 339 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 CHUKO15111 745 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF749O43361 778 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 FRAT2O75474 233 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 OR6B1O95007 311 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 CD1DP15813 335 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 ACADSP16219 412 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 LMO2P25791 158 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 GJB2P29033 226 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 SERPINB6P35237 376 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 ATP4BP51164 291 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 IRX6P78412 446 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 RBBP4Q09028 425 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 IDI1Q13907 227 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 SIX1Q15475 284 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 SMU1Q2TAY7 513 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 AARDQ4LEZ3 155 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 CAPN13Q6MZZ7 669 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 NEPROQ6NW34 567 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 ALKBH5Q6P6C2 394 aaKnown RBP3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF841Q6ZN19 808 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 MCM10Q7L590 875 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 RPAINQ86UA6 219 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 TBC1D10CQ8IV04 446 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 LMNTD2Q8IXW0 634 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 C4orf32Q8N8J7 132 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 CLEC1AQ8NC01 280 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 CSNK1G2-AS1Q8NCQ2 148 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 OR2L2Q8NH16 312 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 GPR148Q8TDV2 347 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 BCL2L2Q92843 193 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 TAAR6Q96RI8 345 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 ERGIC2Q96RQ1 377 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 S1PR3Q99500 378 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 SSX3Q99909 188 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 CCDC28BQ9BUN5 200 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 TSPYL1Q9H0U9 437 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 MMADHCQ9H3L0 296 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 UBE2TQ9NPD8 197 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 DEPPQ9NTK1 212 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 PSORS1C1Q9UIG5 152 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 SIPA1L3O60292 1781 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 STRCQ7RTU9 1775 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 RGPD5Q99666 1765 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 LMO7Q8WWI1 1683 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 PTCH1Q13635 1447 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 A0A1W2PP64 1363 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 METP08581 1390 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 ANKRD36BQ8N2N9 1353 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 TNRQ92752 1358 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 ABCC11Q96J66 1382 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 TUBGCP6Q96RT7 1819 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 WNK3Q9BYP7 1800 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 RPGRIP1LQ68CZ1 1315 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 A0A0A6YYC8 382 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 TRGV8A0A0C4DH27 118 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 OR5H15A6NDH6 313 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 I3L1I5 382 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 PDHXO00330 501 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 TXNL1O43396 289 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 EPOP01588 193 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 GSTA2P09210 222 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 CT45A8P0DMV1 189 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 CT45A9P0DMV2 189 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 CAPN2P17655 700 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 CYP3A5P20815 502 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF10P21506 573 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 GLRA1P23415 457 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 CASP3P42574 277 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 SERPINH1P50454 418 aaKnown RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 RIDAP52758 137 aaKnown RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 ADARP55265 1226 aaKnown RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 COX10Q12887 443 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 RCN2Q14257 317 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 FASTKQ14296 549 aaKnown RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF674Q2M3X9 581 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 CT45A2Q5DJT8 189 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 MUC21Q5SSG8 566 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 PRSS42Q7Z5A4 293 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 CATSPER3Q86XQ3 398 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 TMEM126BQ8IUX1 230 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 SIDT2Q8NBJ9 832 aaKnown RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 TRPV3Q8NET8 790 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 OR1B1Q8NGR6 318 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 GOLGA5Q8TBA6 731 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 PRCCQ92733 491 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF274Q96GC6 653 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 RCHY1Q96PM5 261 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF577Q9BSK1 485 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 PLEKHA3Q9HB20 300 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 PLEK2Q9NYT0 353 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 TRPC4Q9UBN4 977 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 NIP7Q9Y221 180 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 KCNK6Q9Y257 313 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 ADAMTS7Q9UKP4 1686 aa3.03□□□□□ -1.92
HMGB1P11-201ENST00000413899 CDK12Q9NYV4 1490 aaPredicted RBP3.03□□□□□ -1.93
HMGB1P11-201ENST00000413899 CPSF1Q10570 1443 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms