RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SLC22A9Q8IVM8 553 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 C4orf33Q8N1A6 199 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 GHDCQ8N2G8 530 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 MYRIPQ8NFW9 859 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 OR5M3Q8NGP4 307 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 ZBTB9Q96C00 473 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 TM4SF18Q96CE8 201 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 CCDC120Q96HB5 630 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 GSTO2Q9H4Y5 243 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 MID1IP1Q9NPA3 183 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 VPS29Q9UBQ0 182 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 HECTD1Q9ULT8 2610 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 UBFD1O14562 309 aaKnown RBP9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 COPEO14579 308 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 GLRA3O75311 464 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 ULK1O75385 1050 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 KRT6AP02538 564 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 PROCP04070 461 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 CLPSP04118 112 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 KRT6BP04259 564 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 CCL3P10147 92 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 PORP16435 677 aaPredicted RBP9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 KRT4P19013 534 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 PIGAP37287 484 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 CCT5P48643 541 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 KRT6CP48668 564 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 NAGLUP54802 743 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 FOXA1P55317 472 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 SLC37A1P57057 533 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 PPIAP62937 165 aaKnown RBP9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 CMPK2Q5EBM0 449 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 SPDYAQ5MJ70 313 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 PRAMEF20Q5VT98 475 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 SP5Q6BEB4 398 aaPredicted RBP9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 FAM111BQ6SJ93 734 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 OPN5Q6U736 354 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 ZYG11AQ6WRX3 759 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 RTL4Q6ZR62 310 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 FAM47EQ6ZV65 393 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 SLC29A4Q7RTT9 530 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 MRGPRGQ86SM5 289 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 LCA5Q86VQ0 697 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 EIF1ADQ8N9N8 165 aaKnown RBP9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 C7orf57Q8NEG2 295 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 ADCY4Q8NFM4 1077 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 OR2M7Q8NG81 312 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 OR8K3Q8NH51 312 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 CHTF18Q8WVB6 975 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 APIPQ96GX9 242 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 FBXL20Q96IG2 436 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 ART5Q96L15 291 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 ZNF382Q96SR6 550 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 EBPLQ9BY08 206 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 ACPTQ9BZG2 426 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 BRINP2Q9C0B6 783 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 BRF2Q9HAW0 419 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 PFDN4Q9NQP4 134 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 NMRK1Q9NWW6 199 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 SUCOQ9UBS9 1254 aaKnown RBP9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 ADAM29Q9UKF5 820 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 GRID1Q9ULK0 1009 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 PPT2Q9UMR5 302 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 PCDHA9Q9Y5H5 950 aa9.41□□□□□ -0.9
NCKIPSD-202ENST00000413374 CNTRLQ7Z7A1 2325 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 SETXQ7Z333 2677 aaKnown RBP9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 NBPF19A0A087WUL8 3843 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 C2orf92A0A1B0GVN3 265 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 C1orf226A1L170 272 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 PLIN3O60664 434 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 GUCY1B2O75343 617 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 CRCPO75575 148 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 NADKO95544 446 aaPredicted RBP9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 P04436 131 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 IL3P08700 152 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 CPMP14384 443 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 CPA3P15088 417 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 TNFRSF8P28908 595 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 DCTP40126 519 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 RAE1P78406 368 aaKnown RBP9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 DUSP2Q05923 314 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 LCP2Q13094 533 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 EXOSC7Q15024 291 aaKnown RBP9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 LTB4RQ15722 352 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 MPEG1Q2M385 716 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 SPRED3Q2MJR0 410 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 CFAP157Q5JU67 520 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 HLA-DQA1Q5Y7H0 255 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 SLC48A1Q6P1K1 146 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 TDRPQ86YL5 185 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 DOLPP1Q86YN1 238 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 CHERPQ8IWX8 916 aaKnown RBP9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 GALNT12Q8IXK2 581 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 GPALPP1Q8IXQ4 340 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 CCDC116Q8IYX3 515 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 PRR22Q8IZ63 422 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 ZFP62Q8NB50 900 aaPredicted RBP9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 POGLUT1Q8NBL1 392 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 SIMC1Q8NDZ2 872 aa9.4□□□□□ -0.9
NCKIPSD-202ENST00000413374 FAM13CQ8NE31 585 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms