RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 COPS7AQ9UBW8 275 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 CES1P1Q9UKY3 287 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 DLGAP4Q9Y2H0 992 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 ANKUB1A6NFN9 424 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 AZIN1O14977 448 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 OR6B1O95007 311 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 IGKV3-11P04433 115 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 UROSP10746 265 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 CPMP14384 443 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 NT5EP21589 574 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 SSTR4P31391 388 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 ARRB2P32121 409 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 TRHRP34981 398 aaPredicted RBP12.19□□□□□ -0.46
SSB-203ENST00000413002 RFC3P40938 356 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 SOX3P41225 446 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 SSR4P51571 173 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 ASPHQ12797 758 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 ARL13AQ5H913 290 aaPredicted RBP12.19□□□□□ -0.46
SSB-203ENST00000413002 SLC48A1Q6P1K1 146 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 FAM111BQ6SJ93 734 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 IL20RBQ6UXL0 311 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 CYP4Z2PQ8N1L4 340 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 ARMC10Q8N2F6 343 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 BCORP1Q8N888 145 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 ADCY4Q8NFM4 1077 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 C16orf78Q8WTQ4 265 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 KLHL29Q96CT2 875 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 SCMH1Q96GD3 660 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 FBXL20Q96IG2 436 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 GAL3ST4Q96RP7 486 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 RASL10BQ96S79 203 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 MCM8Q9UJA3 840 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 ERVK-11Q9UQG0 969 aa12.19□□□□□ -0.46
SSB-203ENST00000413002 YARS2Q9Y2Z4 477 aaKnown RBP12.19□□□□□ -0.46
SSB-203ENST00000413002 POLR3HQ9Y535 204 aaPredicted RBP12.19□□□□□ -0.46
SSB-203ENST00000413002 COL12A1Q99715 3063 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 C1orf226A1L170 272 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 SYNDIG1LA6NDD5 238 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 G3V3Y1 287 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 ZNHIT1O43257 154 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 CTIFO43310 598 aaKnown RBP12.18□□□□□ -0.46
SSB-203ENST00000413002 DYRK3O43781 588 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 SEMA7AO75326 666 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 GUCY1B2O75343 617 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 CLPSP04118 112 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 TUBBP07437 444 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 BPGMP07738 259 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 ANXA4P09525 319 aaPredicted RBP12.18□□□□□ -0.46
SSB-203ENST00000413002 LINC00032P0C843 101 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 PORP16435 677 aaPredicted RBP12.18□□□□□ -0.46
SSB-203ENST00000413002 TIA1P31483 386 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■■■■□ 21.2
SSB-203ENST00000413002 ETV4P43268 484 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 KCNK10P57789 538 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 GPR85P60893 370 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 NAA20P61599 178 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 MPP2Q14168 576 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 LTB4RQ15722 352 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 PRSS53Q2L4Q9 553 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 SPIN4Q56A73 249 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 CES4AQ5XG92 561 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 ZNF324BQ6AW86 544 aaPredicted RBP12.18□□□□□ -0.46
SSB-203ENST00000413002 TMEM64Q6YI46 380 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 TRIM46Q7Z4K8 759 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 GALNT12Q8IXK2 581 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 CPSF7Q8N684 471 aaKnown RBP12.18□□□□□ -0.46
SSB-203ENST00000413002 SIMC1Q8NDZ2 872 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 OR2T11Q8NH01 316 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 ASB15Q8WXK1 588 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 NR4A3Q92570 626 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 EXOSC8Q96B26 276 aaKnown RBP12.18□□□□□ -0.46
SSB-203ENST00000413002 SLX1AQ9BQ83 275 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 FAIM2Q9BWQ8 316 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 TUBB1Q9H4B7 451 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 ZNF395Q9H8N7 513 aaPredicted RBP12.18□□□□□ -0.46
SSB-203ENST00000413002 CXorf21Q9HAI6 301 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 KCNK9Q9NPC2 374 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 UTS2RQ9UKP6 389 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 CCL27Q9Y4X3 112 aa12.18□□□□□ -0.46
SSB-203ENST00000413002 USP9XQ93008 2570 aaPredicted RBP12.18□□□□□ -0.46
SSB-203ENST00000413002 FLNBO75369 2602 aaKnown RBP12.17□□□□□ -0.46
SSB-203ENST00000413002 SERTM1A2A2V5 107 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 A8MVJ9 347 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 NME2P1O60361 137 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 SEC22BO75396 215 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 NME6O75414 186 aaPredicted RBP12.17□□□□□ -0.46
SSB-203ENST00000413002 LYPLA1O75608 230 aaPredicted RBP12.17□□□□□ -0.46
SSB-203ENST00000413002 NME2P22392 152 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 SERPINB4P48594 390 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 TDGF1P3P51864 188 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 SLC37A1P57057 533 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 TRA2BP62995 288 aaKnown RBP12.17□□□□□ -0.46
SSB-203ENST00000413002 BIKQ13323 160 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 UBAP2LQ14157 1087 aaKnown RBP12.17□□□□□ -0.46
SSB-203ENST00000413002 ELOAQ14241 798 aaKnown RBP12.17□□□□□ -0.46
SSB-203ENST00000413002 EXOSC7Q15024 291 aaKnown RBP12.17□□□□□ -0.46
SSB-203ENST00000413002 SPRED3Q2MJR0 410 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 RNFT1Q5M7Z0 435 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 BEND6Q5SZJ8 279 aaPredicted RBP12.17□□□□□ -0.46
SSB-203ENST00000413002 KANK2Q63ZY3 851 aa12.17□□□□□ -0.46
SSB-203ENST00000413002 RNF111Q6ZNA4 994 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms