RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 PROB1E7EW31 1015 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 SPECC1L-ADORA2AF8WAN1 911 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 POLR3GO15318 223 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 KRT86O43790 486 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 LCMT2O60294 686 aaKnown RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 WDR1O75083 606 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 PRKRAO75569 313 aaKnown RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 FAM106CPP0CH98 169 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 FCGR1AP12314 374 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF12P17014 697 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 GM2AP17900 193 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 TPSB2P20231 275 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 CSTF2P33240 577 aaKnown RBP eCLIP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 RFC2P35250 354 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 CYLC1P35663 651 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 NPY2RP49146 381 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 TUBA1BP68363 451 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 ACY1Q03154 408 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 HYAL1Q12794 435 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 HNRNPA0Q13151 305 aaKnown RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 KRT81Q14533 505 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 HERC3Q15034 1050 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 TPSAB1Q15661 275 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 PCK2Q16822 640 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 ZSWIM7Q19AV6 140 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 DUOXA1Q1HG43 343 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF776Q68DI1 518 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 OR7E24Q6IFN5 339 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 TRNP1Q6NT89 227 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 CDC42EP5Q6NZY7 148 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 SLC27A4Q6P1M0 643 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 DHRS11Q6UWP2 260 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 WASH2PQ6VEQ5 465 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 TMEM64Q6YI46 380 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 KIF6Q6ZMV9 814 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 ANO5Q75V66 913 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 SLC22A16Q86VW1 577 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 GPALPP1Q8IXQ4 340 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 MNS1Q8NEH6 495 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 DDHD1Q8NEL9 900 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 OR4C15Q8NGM1 316 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 DNAJA4Q8WW22 397 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 C11orf24Q96F05 449 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 AGAP3Q96P47 875 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 CITED1Q99966 193 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 C11orf70Q9BRQ4 267 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 XKR8Q9H6D3 395 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 SLC38A7Q9NVC3 462 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 SUN2Q9UH99 717 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 CDH9Q9ULB4 789 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 DIMT1Q9UNQ2 313 aaKnown RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 IFT52Q9Y366 437 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 MRPL11Q9Y3B7 192 aaKnown RBP4.06□□□□□ -1.76
BRCA1-204ENST00000412061 OR2W1Q9Y3N9 320 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 A0A0G2JNG1 304 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 A0A1B0GTQ1 180 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 HEATR9A2RTY3 570 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 LILRA5A6NI73 299 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 E9PMD0 336 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 GOLGA8SH3BPF8 625 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 SGK494L7N484 410 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 MLNRO43193 412 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 ZNHIT1O43257 154 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 SLC28A2O43868 658 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 NDUFA7O95182 113 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 PMS2P2O95744 297 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 EML2O95834 649 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 CALCAP01258 141 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 MT-ND2P03891 347 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 ACAA1P09110 424 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-204ENST00000412061 CPN1P15169 458 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 MX1P20591 662 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 LHCGRP22888 699 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 SSR1P43307 286 aaKnown RBP4.05□□□□□ -1.76
BRCA1-204ENST00000412061 ALDH3B1P43353 468 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 HADHBP55084 474 aaKnown RBP4.05□□□□□ -1.76
BRCA1-204ENST00000412061 SEC61A1P61619 476 aaKnown RBP4.05□□□□□ -1.76
BRCA1-204ENST00000412061 PITX1P78337 314 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-204ENST00000412061 DLG1Q12959 904 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 DNAJC3Q13217 504 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 MFAP5Q13361 173 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 ITGA9Q13797 1035 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 HNRNPDQ14103 355 aaKnown RBP4.05□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF234Q14588 700 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 KIR2DS5Q14953 304 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 ZRSR1Q15695 479 aaKnown RBP4.05□□□□□ -1.76
BRCA1-204ENST00000412061 GPR33Q49SQ1 333 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 FBXO48Q5FWF7 155 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 TMEM225Q6GV28 225 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 TRPM8Q7Z2W7 1104 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 GOLGA7Q7Z5G4 137 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 SERINC5Q86VE9 423 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 ECHDC2Q86YB7 292 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 CCDC36Q8IYA8 594 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 RCOR2Q8IZ40 523 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 MUC20Q8N307 709 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-204ENST00000412061 MLKLQ8NB16 471 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 CCDC197Q8NCU1 140 aa4.05□□□□□ -1.76
BRCA1-204ENST00000412061 ADAD2Q8NCV1 583 aaKnown RBP4.05□□□□□ -1.76
BRCA1-204ENST00000412061 BPIFCQ8NFQ6 507 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms