RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MCMBPQ9BTE3 642 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 OR51B5Q9H339 312 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 TRMT1Q9NXH9 659 aaKnown RBP15.35■□□□□ 0.05
MRPL55-220ENST00000411464 PHF11Q9UIL8 331 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 NAV3Q8IVL0 2385 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 ANKHD1Q8IWZ3 2542 aaKnown RBP15.34■□□□□ 0.05
MRPL55-220ENST00000411464 CAPN14A8MX76 684 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 TP53I11O14683 189 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 PHGDHO43175 533 aaKnown RBP15.34■□□□□ 0.05
MRPL55-220ENST00000411464 PIAS1O75925 651 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 LRATO95237 230 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 WISP3O95389 354 aaPredicted RBP15.34■□□□□ 0.05
MRPL55-220ENST00000411464 EPXP11678 715 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 STMN1P16949 149 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 TACR1P25103 407 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 HERVK_113P63132 956 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 ERVK-8P63133 956 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 FASTKD3Q14CZ7 662 aaKnown RBP15.34■□□□□ 0.05
MRPL55-220ENST00000411464 C18orf63Q68DL7 685 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 PAMR1Q6UXH9 720 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 CAPN12Q6ZSI9 719 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 ZBED8Q8IZ13 594 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 TAGAPQ8N103 731 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 OR7G3Q8NG95 312 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 DIO2Q92813 273 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 RIT1Q92963 219 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 EXT2Q93063 718 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 HSPBAP1Q96EW2 488 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 SORBS1Q9BX66 1292 aaKnown RBP15.34■□□□□ 0.05
MRPL55-220ENST00000411464 ERVK-6Q9BXR3 956 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 TRIM31Q9BZY9 425 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 WWTR1Q9GZV5 400 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 ADGRE2Q9UHX3 823 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 CNOT11Q9UKZ1 510 aaKnown RBP15.34■□□□□ 0.05
MRPL55-220ENST00000411464 ERVK-19Q9WJR5 959 aa15.34■□□□□ 0.05
MRPL55-220ENST00000411464 ABCA2Q9BZC7 2435 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 ANKRD33BA6NCL7 494 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 OR6C76A6NM76 312 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 SEC31AO94979 1220 aaKnown RBP15.33■□□□□ 0.04
MRPL55-220ENST00000411464 ACSL3O95573 720 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 TCP1P17987 556 aaKnown RBP15.33■□□□□ 0.04
MRPL55-220ENST00000411464 BUD31P41223 144 aaPredicted RBP15.33■□□□□ 0.04
MRPL55-220ENST00000411464 WNT3P56703 355 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 TNFRSF17Q02223 184 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 CRYZQ08257 329 aaKnown RBP15.33■□□□□ 0.04
MRPL55-220ENST00000411464 DDX39BQ13838 428 aaKnown RBP15.33■□□□□ 0.04
MRPL55-220ENST00000411464 E2F2Q14209 437 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 NTRK2Q16620 822 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 DEFB113Q30KQ7 82 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 NSUN5P2Q63ZY6 315 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 CDKL2Q92772 493 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 EPB41L4BQ9H329 900 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 SMYD2Q9NRG4 433 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 CAMK2AQ9UQM7 478 aa15.33■□□□□ 0.04
MRPL55-220ENST00000411464 AKAP6Q13023 2319 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 ACANP16112 2415 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 C2orf92A0A1B0GVN3 265 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 E7ESA3 106 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 TRIM3O75382 744 aaPredicted RBP15.32■□□□□ 0.04
MRPL55-220ENST00000411464 SNX4O95219 450 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 ATE1O95260 518 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 GPR75O95800 540 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 ZNF136P52737 540 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 SLC37A1P57057 533 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 TOMM20Q15388 145 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 SPRED3Q2MJR0 410 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 POMZP3Q6PJE2 187 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 BIVMQ86UB2 503 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 PACS2Q86VP3 889 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 HUS1BQ8NHY5 278 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 STAG3L4Q8TBR4 150 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 PYROXD1Q8WU10 500 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 UBXN10Q96LJ8 280 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 OPTCQ9UBM4 332 aa15.32■□□□□ 0.04
MRPL55-220ENST00000411464 EFCAB8A8MWE9 144 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 KDM4EB2RXH2 506 aaPredicted RBP15.31■□□□□ 0.04
MRPL55-220ENST00000411464 PRKRAO75569 313 aaKnown RBP15.31■□□□□ 0.04
MRPL55-220ENST00000411464 HPNP05981 417 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 EPB42P16452 691 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 CTSSP25774 331 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 PTX3P26022 381 aaPredicted RBP15.31■□□□□ 0.04
MRPL55-220ENST00000411464 OPRM1P35372 400 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 PIK3CBP42338 1070 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 MASP1P48740 699 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 CDK9P50750 372 aaKnown RBP15.31■□□□□ 0.04
MRPL55-220ENST00000411464 HNRNPH2P55795 449 aaKnown RBP15.31■□□□□ 0.04
MRPL55-220ENST00000411464 RAB10P61026 200 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 PCDH1Q08174 1060 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 EBPQ15125 230 aaKnown RBP15.31■□□□□ 0.04
MRPL55-220ENST00000411464 RPS6KA2Q15349 733 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 HLA-DQA1Q5Y7H0 255 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 VASNQ6EMK4 673 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 TMEM64Q6YI46 380 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 MYLK4Q86YV6 388 aaPredicted RBP15.31■□□□□ 0.04
MRPL55-220ENST00000411464 ZCCHC7Q8N3Z6 543 aaKnown RBP15.31■□□□□ 0.04
MRPL55-220ENST00000411464 WFDC11Q8NEX6 87 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 LINC01560Q8TB33 94 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 TP53INP1Q96A56 240 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 RILPQ96NA2 401 aa15.31■□□□□ 0.04
MRPL55-220ENST00000411464 GNRHR2Q96P88 292 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms