RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ARF5P84085 180 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 LRRC74AQ0VAA2 488 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 IL18Q14116 193 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 NFE2L1Q14494 772 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 LEXMQ3ZCV2 418 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 C9orf50Q5SZB4 431 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 ZNF730Q6ZMV8 503 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 HTR3DQ70Z44 454 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 LAPTM4BQ86VI4 370 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 OR8H3Q8N146 312 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 HJURPQ8NCD3 748 aaPredicted RBP14.69□□□□□ -0.06
LIMS2-205ENST00000409455 WFDC5Q8TCV5 224 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 KATNB1Q9BVA0 655 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 SLC12A9Q9BXP2 914 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 LSM7Q9UK45 103 aaKnown RBP14.69□□□□□ -0.06
LIMS2-205ENST00000409455 SPIN1Q9Y657 262 aaPredicted RBP14.69□□□□□ -0.06
LIMS2-205ENST00000409455 DSPPQ9NZW4 1301 aa14.69□□□□□ -0.06
LIMS2-205ENST00000409455 PRAMEF33A0A0G2JMD5 474 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 MGAT4DA6NG13 374 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 SNTNA6NMZ2 147 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 C5orf67F2Z3F1 127 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 H3BN98 237 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 PRAMEF10O60809 474 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 PRAMEF4O60810 478 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 IFNW1P05000 195 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 C8GP07360 202 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 ANXA4P09525 319 aaPredicted RBP14.68□□□□□ -0.06
LIMS2-205ENST00000409455 FAM157BP0CG42 384 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 EPCAMP16422 314 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 STK19P49842 368 aaPredicted RBP14.68□□□□□ -0.06
LIMS2-205ENST00000409455 RHOAP61586 193 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 ABATP80404 500 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 IRF8Q02556 426 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 ZNF33BQ06732 778 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 SF3A2Q15428 464 aaKnown RBP14.68□□□□□ -0.06
LIMS2-205ENST00000409455 PRAMEF9Q5VWM5 478 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 ANKRD54Q6NXT1 300 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 CAMKMTQ7Z624 323 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 TMEM145Q8NBT3 493 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 OR8J1Q8NGP2 316 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 C1GALT1C1Q96EU7 318 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 GALNT9Q9HCQ5 603 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 GPATCH2Q9NW75 528 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 RWDD3Q9Y3V2 267 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 FAM227AF5H4B4 570 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 LEFTY2O00292 366 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 RNASET2O00584 256 aaKnown RBP14.68□□□□□ -0.06
LIMS2-205ENST00000409455 SCO1O75880 301 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 CD160O95971 181 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 CA3P07451 260 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 CHRM5P08912 532 aaPredicted RBP14.68□□□□□ -0.06
LIMS2-205ENST00000409455 C1SP09871 688 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 TNNI3P19429 210 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 NSG1P42857 185 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 MVDP53602 400 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 PER3P56645 1201 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 CDK6Q00534 326 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 UBE3AQ05086 875 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 HEPACAMQ14CZ8 416 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 CHRNA6Q15825 494 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 ZNF770Q6IQ21 691 aaPredicted RBP14.68□□□□□ -0.06
LIMS2-205ENST00000409455 METAP1DQ6UB28 335 aaPredicted RBP14.68□□□□□ -0.06
LIMS2-205ENST00000409455 TPGS1Q6ZTW0 290 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 NXPE1Q8N323 547 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 OXR1Q8N573 874 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 OR52P1PQ8NH57 321 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 SLC35A5Q9BS91 424 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 PPP1R3EQ9H7J1 279 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 PHF11Q9UIL8 331 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 CCL26Q9Y258 94 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 ITM2BQ9Y287 266 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 GSTK1Q9Y2Q3 226 aa14.68□□□□□ -0.06
LIMS2-205ENST00000409455 LOC102723532A0A0G2JNH3 316 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 INMT-MINDY4F8WBC2 141 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 I3L521 148 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 SLC30A4O14863 429 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 POU6F2P78424 691 aaPredicted RBP14.67□□□□□ -0.06
LIMS2-205ENST00000409455 RGS1Q08116 209 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 CDH18Q13634 790 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 GPR33Q49SQ1 333 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 CRB2Q5IJ48 1285 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 ATAT1Q5SQI0 421 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 ZNF697Q5TEC3 545 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 LIPJQ5W064 366 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 BICRALQ6AI39 1079 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 TRIM40Q6P9F5 258 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 TEX261Q6UWH6 196 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 TMIGD1Q6UXZ0 262 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 ZNF852Q6ZMS4 543 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 IL17RCQ8NAC3 791 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 OR52N2Q8NGI0 321 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 CREB3L1Q96BA8 519 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 PHF21AQ96BD5 680 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 SLC6A18Q96N87 628 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 C17orf62Q9BQA9 187 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 TMEM38AQ9H6F2 299 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 B3GAT2Q9NPZ5 323 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 SPATA6Q9NWH7 488 aaPredicted RBP14.67□□□□□ -0.06
LIMS2-205ENST00000409455 NDOR1Q9UHB4 597 aa14.67□□□□□ -0.06
LIMS2-205ENST00000409455 ING4Q9UNL4 249 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms