RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 SMYD1Q8NB12 490 aa7.98□□□□□ -1.13
SH3D19-202ENST00000409252 BBS10Q8TAM1 723 aa7.98□□□□□ -1.13
SH3D19-202ENST00000409252 TSPEARQ8WU66 669 aa7.98□□□□□ -1.13
SH3D19-202ENST00000409252 MRPL48Q96GC5 212 aaKnown RBP7.98□□□□□ -1.13
SH3D19-202ENST00000409252 FER1L6-AS2Q96M78 137 aa7.98□□□□□ -1.13
SH3D19-202ENST00000409252 TESMINQ9Y4I5 508 aa7.98□□□□□ -1.13
SH3D19-202ENST00000409252 SPIN1Q9Y657 262 aaPredicted RBP7.98□□□□□ -1.13
SH3D19-202ENST00000409252 MYOFQ9NZM1 2061 aa7.98□□□□□ -1.13
SH3D19-202ENST00000409252 LOC105369274A0A096LPK9 316 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 LOC102723532A0A0G2JNH3 316 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 ACOT7O00154 380 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 TNFRSF11BO00300 401 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 PSMG1O95456 288 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 AK1P00568 194 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 MT-ND1P03886 318 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 CPMP14384 443 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 IDH2P48735 452 aaKnown RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 ACADVLP49748 655 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 MTX3Q5HYI7 312 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 COLEC12Q5KU26 742 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 PDSS1Q5T2R2 415 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 REEP3Q6NUK4 255 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 YTHDF3Q7Z739 585 aaKnown RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 OR4N4Q8N0Y3 316 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 SLC22A18ASQ8N1D0 253 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 OR2A1Q8NGT9 310 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 PIGXQ8TBF5 258 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 WDR60Q8WVS4 1066 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 TAAR9Q96RI9 348 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 ZPBPQ9BS86 351 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 NT5DC2Q9H857 520 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 KCMF1Q9P0J7 381 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 IKZF3Q9UKT9 509 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 M0QX08 132 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 GPR37L1O60883 481 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 B3GALT4O96024 378 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 MTHFD2P13995 350 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 MRPS35P82673 323 aaKnown RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 FADDQ13158 208 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 SFT2D3Q587I9 215 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 ABHD17CQ6PCB6 329 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 AMIGO2Q86SJ2 522 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 PRR22Q8IZ63 422 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 OR14A16Q8NHC5 309 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 MAGEE2Q8TD90 523 aaPredicted RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 DNAJC9Q8WXX5 260 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 SLC25A36Q96CQ1 311 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 GPR78Q96P69 363 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 SLC38A2Q96QD8 506 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 APOL4Q9BPW4 351 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 LIPT1Q9Y234 373 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 MAN2B2Q9Y2E5 1009 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 EEDO75530 441 aaKnown RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 TIPRLO75663 272 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 SOX30O94993 753 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 WNT1P04628 370 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 ICAM2P13598 275 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 RAPSNQ13702 412 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 TRIM25Q14258 630 aaKnown RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 AGERQ15109 404 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 TAF13Q15543 124 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 OR52R1Q8NGF1 315 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 OR52E4Q8NGH9 312 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 DNASE2BQ8WZ79 361 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 FAM122AQ96E09 287 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 SLC6A20Q9NP91 592 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 TEX10Q9NXF1 929 aaPredicted RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 TMPRSS11EQ9UL52 423 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 ADAMDEC1O15204 470 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 ZFAND5O76080 213 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 TSPAN12O95859 305 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 CSTAP01040 98 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 NPPAP01160 153 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 GSK3BP49841 420 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 EXOSC7Q15024 291 aaKnown RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 CWF19L1Q69YN2 538 aaKnown RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 TTC33Q6PID6 262 aaPredicted RBP7.97□□□□□ -1.13
SH3D19-202ENST00000409252 BLOC1S3Q6QNY0 202 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 MSANTD1Q6ZTZ1 278 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 ZNF786Q8N393 782 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 C3orf30Q96M34 536 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 ACTRT3Q9BYD9 372 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 MMACHCQ9Y4U1 282 aa7.97□□□□□ -1.13
SH3D19-202ENST00000409252 FAM149AA5PLN7 773 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 XKRYO14609 159 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 LSM1O15116 133 aaKnown RBP7.96□□□□□ -1.13
SH3D19-202ENST00000409252 TP73O15350 636 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 PEX1O43933 1283 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 CDC40O60508 579 aaKnown RBP eCLIP7.96□□□□□ -1.13
SH3D19-202ENST00000409252 ALOX12BO75342 701 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 CDC42P60953 191 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 GANABQ14697 944 aaKnown RBP7.96□□□□□ -1.13
SH3D19-202ENST00000409252 TPRG1LQ5T0D9 272 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 ZNF544Q6NX49 715 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 PAPD4Q6PIY7 484 aaKnown RBP7.96□□□□□ -1.13
SH3D19-202ENST00000409252 CCDC81Q6ZN84 652 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 ADGRF3Q8IZF5 1079 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 SLC6A16Q9GZN6 736 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 N6AMT1Q9Y5N5 214 aa7.96□□□□□ -1.13
SH3D19-202ENST00000409252 SRCAPQ6ZRS2 3230 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms