RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 OR5T2Q8NGG2 359 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 OR8D1Q8WZ84 308 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 ARL11Q969Q4 196 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 TESCQ96BS2 214 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 TREX1Q9NSU2 369 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 ARSBP15848 533 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 CMPK1P30085 196 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 SSTR2P30874 369 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 PCGF2P35227 344 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 NUDT1P36639 197 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 SELENBP1Q13228 472 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 ARFRP1Q13795 201 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 TOR1AIP1Q5JTV8 583 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 TPRG1Q6ZUI0 275 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 FUNDC1Q8IVP5 155 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 TEX26Q8N6G2 289 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 SLC35B4Q969S0 331 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 CLIP3Q96DZ5 547 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 C7orf34Q96L11 122 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 CENPOQ9BU64 300 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 ACTR10Q9NZ32 417 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 A0A1B0GVC2 190 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 SLC16A5O15375 505 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 PGAM2P15259 253 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 NFATC2Q13469 925 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 RGNQ15493 299 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 NKAPLQ5M9Q1 402 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 NDUFAF5Q5TEU4 345 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 PSAPL1Q6NUJ1 521 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 HDDC3Q8N4P3 179 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 CLDN22Q8N7P3 220 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 OR2L5Q8NG80 312 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 OR4K5Q8NGD3 323 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 KIAA1143Q96AT1 154 aaPredicted RBP16.91■□□□□ 0.3
SMPD4-202ENST00000409031 MFFQ9GZY8 342 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 FN3KQ9H479 309 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 CROCCQ5TZA2 2017 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 ARHGAP33O14559 1287 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 SLC22A5O76082 557 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 OAZ2O95190 189 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 CYB5AP00167 134 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 PM20D1Q6GTS8 502 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 IDO2Q6ZQW0 420 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 RFPL4BQ6ZWI9 263 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 DNAJC5GQ8N7S2 189 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 ADAP2Q9NPF8 381 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 ASAH2Q9NR71 780 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 CARNS1A5YM72 827 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 EIF1AYO14602 144 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 SCAMP2O15127 329 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 FABP7O15540 132 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 C1QBP02746 253 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 SLC35G6P0C7Q6 338 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 EIF1AXP47813 144 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 GCGRP47871 477 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 PSMD8P48556 350 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 RAB8AP61006 207 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 GDPD3Q7L5L3 318 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 ATOH8Q96SQ7 321 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 SYT4Q9H2B2 425 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 AKIP1Q9NQ31 210 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 UTS2RQ9UKP6 389 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 ACSL6Q9UKU0 697 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 SPDEFO95238 335 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 DBIP07108 87 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 SPARCP09486 303 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 ALPPL2P10696 532 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 PTPN2P17706 415 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 PRDX3P30048 256 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 S100A10P60903 97 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 ISL1P61371 349 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 VLDLRP98155 873 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 MC2RQ01718 297 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF33BQ06732 778 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 LASP1Q14847 261 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 GPR68Q15743 365 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 CES4AQ5XG92 561 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 RPL13AP3Q6NVV1 102 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 METTL2BQ6P1Q9 378 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 DPP7Q9UHL4 492 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 FBXL3Q9UKT7 428 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 OR2A25A4D2G3 310 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 OR6C74A6NCV1 312 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 UBFD1O14562 309 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 HAPLN1P10915 354 aaPredicted RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 RACK1P63244 317 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 RPL19P84098 196 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 SLC24A5Q71RS6 500 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 LRRC28Q86X40 367 aaPredicted RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 LAX1Q8IWV1 398 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 MAL2Q969L2 176 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 FKBP10Q96AY3 582 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF700Q9H0M5 742 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 SLC28A3Q9HAS3 691 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 NDOR1Q9UHB4 597 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 POLHQ9Y253 713 aa16.9■□□□□ 0.3
SMPD4-202ENST00000409031 FARSAQ9Y285 508 aaKnown RBP16.9■□□□□ 0.3
SMPD4-202ENST00000409031 SMAD9O15198 467 aaKnown RBP16.89■□□□□ 0.29
SMPD4-202ENST00000409031 HPGDSO60760 199 aa16.89■□□□□ 0.29
SMPD4-202ENST00000409031 LAMP1P11279 417 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms