RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TLR4O00206 839 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 NR2F1P10589 423 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 CDH3P22223 829 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 NCBP2P52298 156 aaKnown RBP eCLIP15.93■□□□□ 0.14
NUP50-203ENST00000407019 DGKEP52429 567 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 SMIM11AP58511 58 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 IFITM3Q01628 133 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 ZIC1Q15915 447 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 C2orf27AQ580R0 203 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 NUDT18Q6ZVK8 323 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 KRT73Q86Y46 540 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 RBM45Q8IUH3 476 aaKnown RBP15.93■□□□□ 0.14
NUP50-203ENST00000407019 C7orf61Q8IZ16 206 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 OR5D16Q8NGK9 328 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 XAGE5Q8WWM1 108 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 PLA2G2FQ9BZM2 168 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 ARMC7Q9H6L4 198 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 ZCCHC3Q9NUD5 404 aaKnown RBP15.93■□□□□ 0.14
NUP50-203ENST00000407019 TAS2R16Q9NYV7 291 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 ACAD8Q9UKU7 415 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 PCDHGA3Q9Y5H0 932 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 GPC6Q9Y625 555 aaPredicted RBP15.93■□□□□ 0.14
NUP50-203ENST00000407019 TRPM6Q9BX84 2022 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 CD72P21854 359 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 GRK5P34947 590 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 RGS6P49758 472 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 KHKP50053 298 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 SGCGQ13326 291 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 ILKQ13418 452 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 SLC9A5Q14940 896 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 LACC1Q8IV20 430 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 OR52E1Q8NGJ3 308 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 DACH2Q96NX9 599 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 BBS4Q96RK4 519 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 BTBD1Q9H0C5 482 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 KLHL31Q9H511 634 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 RMI1Q9H9A7 625 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 PRDM8Q9NQV8 689 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 IFT52Q9Y366 437 aa15.93■□□□□ 0.14
NUP50-203ENST00000407019 LOC100506127A0A0U1RQW1 187 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 PRR23AA6NEV1 266 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 ZW10O43264 779 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 SOX14O95416 240 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 STATHP02808 62 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 CEACAM5P06731 702 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 HSMCR30P0CW71 290 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 PIPP12273 146 aaPredicted RBP15.92■□□□□ 0.14
NUP50-203ENST00000407019 RPS21P63220 83 aaKnown RBP15.92■□□□□ 0.14
NUP50-203ENST00000407019 RELAQ04206 551 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 SLX4IPQ5VYV7 408 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 SNX29P2Q8IUI4 249 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 FAM20CQ8IXL6 584 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 AMER2Q8N7J2 671 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 ZNF513Q8N8E2 541 aaPredicted RBP15.92■□□□□ 0.14
NUP50-203ENST00000407019 BBS10Q8TAM1 723 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 OR51E2Q9H255 320 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 MVB12BQ9H7P6 319 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 CERS4Q9HA82 394 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 SLC6A20Q9NP91 592 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 NDOR1Q9UHB4 597 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 MOSPD1Q9UJG1 213 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 PLEKHM1Q9Y4G2 1056 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 A3GALT2U3KPV4 340 aa15.92■□□□□ 0.14
NUP50-203ENST00000407019 OR52A4PA6NMU1 304 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 PDZK1P1A8MUH7 402 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 MAN2B1O00754 1011 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 HAT1O14929 419 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 ERI3O43414 337 aaKnown RBP15.91■□□□□ 0.14
NUP50-203ENST00000407019 PRKRAO75569 313 aaKnown RBP15.91■□□□□ 0.14
NUP50-203ENST00000407019 UGT2B17O75795 530 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 DBTP11182 482 aaKnown RBP15.91■□□□□ 0.14
NUP50-203ENST00000407019 SLC15A1P46059 708 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 CD97P48960 835 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 ANXA11P50995 505 aaKnown RBP15.91■□□□□ 0.14
NUP50-203ENST00000407019 XKP51811 444 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 PPP5CP53041 499 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 ERVK-21P61565 698 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 SNRPGP62308 76 aaKnown RBP15.91■□□□□ 0.14
NUP50-203ENST00000407019 SLAMF1Q13291 335 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 TOR1AIP1Q5JTV8 583 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 ZNF776Q68DI1 518 aaPredicted RBP15.91■□□□□ 0.14
NUP50-203ENST00000407019 C12orf73Q69YU5 71 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 PLAG1Q6DJT9 500 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 FAM109BQ6ICB4 259 aaPredicted RBP15.91■□□□□ 0.14
NUP50-203ENST00000407019 PGBD2Q6P3X8 592 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 TMEM64Q6YI46 380 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 TBC1D19Q8N5T2 526 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 WDR36Q8NI36 951 aaKnown RBP15.91■□□□□ 0.14
NUP50-203ENST00000407019 GANCQ8TET4 914 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 MS4A6EQ96DS6 147 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 IL4I1Q96RQ9 567 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 WFDC6Q9BQY6 131 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 FUZQ9BT04 418 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 C1QTNF2Q9BXJ5 285 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 CCDC59Q9P031 241 aaKnown RBP15.91■□□□□ 0.14
NUP50-203ENST00000407019 SLC17A4Q9Y2C5 497 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 H3BN98 237 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 M0R3H8 397 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 KCNJ13O60928 360 aa15.91■□□□□ 0.14
NUP50-203ENST00000407019 GUCY1B2O75343 617 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms