RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 KEAP1Q14145 624 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 GPR19Q15760 415 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 ZDHHC1Q8WTX9 485 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 PROX1Q92786 737 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 HLA-CQ95604 372 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 SMIM10Q96HG1 83 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 NPLQ9BXD5 320 aaPredicted RBP23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 GMPPBQ9Y5P6 360 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 SLCO1B1Q9Y6L6 691 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 LOC105369274A0A096LPK9 316 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 LOC102723532A0A0G2JNH3 316 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 B3GALT2O43825 422 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 FHP07954 510 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 PVRP15151 417 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 RHCEP18577 417 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 CD247P20963 164 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 ZNF10P21506 573 aaPredicted RBP23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 CPN2P22792 545 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 PPP2R1BP30154 601 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 CLK3P49761 638 aaKnown RBP23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 MAPK11Q15759 364 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 SYPL1Q16563 259 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 ZBED5Q49AG3 693 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 BROXQ5VW32 411 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 KCTD8Q6ZWB6 473 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 ABHD13Q7L211 337 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 RBM12BQ8IXT5 1001 aaKnown RBP23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 OR4N4Q8N0Y3 316 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 OR5D16Q8NGK9 328 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 OR4C15Q8NGM1 316 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 OR52J3Q8NH60 311 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 BAHD1Q8TBE0 780 aaPredicted RBP23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 C3orf14Q9HBI5 128 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 J3KTA2 159 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 EMC8O43402 210 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 FESP07332 822 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 LSSP48449 732 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 PRR5P85299 388 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 HHEXQ03014 270 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 DEFB134Q4QY38 66 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 FRMPD2BQ6IN97 320 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 ARMC6Q6NXE6 501 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 TMEM107Q6UX40 140 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 DEFB119Q8N690 84 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 OR10G2Q8NGC3 310 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 RASSF5Q8WWW0 418 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 APOL4Q9BPW4 351 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 POLR1BQ9H9Y6 1135 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 HSPE1-MOB4S4R3N1 261 aa23.27■■□□□ 1.32
DNMT3A-206ENST00000406659 FAM170BA6NMN3 283 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 H0YGG7 62 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 SERPINB7O75635 380 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 EIF2S1P05198 315 aaKnown RBP23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 ARF3P61204 181 aaPredicted RBP23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 TNFRSF17Q02223 184 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 MICAQ29983 383 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 EXOC3L2Q2M3D2 409 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 PTCRAQ6ISU1 281 aaPredicted RBP23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 B3GNT6Q6ZMB0 384 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 OOSP2Q86WS3 158 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 ZNF761Q86XN6 746 aaPredicted RBP23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 KRT73Q86Y46 540 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 ZNF655Q8N720 491 aaPredicted RBP23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 ZNF681Q96N22 645 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 COL21A1Q96P44 957 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 FEVQ99581 238 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 YIPF4Q9BSR8 244 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 EVA1BQ9NVM1 165 aa23.26■■□□□ 1.31
DNMT3A-206ENST00000406659 EYSQ5T1H1 3165 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 A0A1W2PS29 197 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 B4DGG1 531 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 AHCYL1O43865 530 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 ANXA8P13928 327 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 TLX1P31314 330 aaPredicted RBP23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 NPRL3Q12980 569 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 CDK5R2Q13319 367 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 FZD5Q13467 585 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 GNA13Q14344 377 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 CEBPEQ15744 281 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 LGI4Q8N135 537 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 SLC5A8Q8N695 610 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 FBLIM1Q8WUP2 373 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 TREX2Q9BQ50 279 aaPredicted RBP23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 LRRC61Q9BV99 259 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 VCX3AQ9NNX9 186 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 PAPOLBQ9NRJ5 636 aaKnown RBP23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 KCMF1Q9P0J7 381 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 SEC14L3Q9UDX4 400 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 RSL24D1Q9UHA3 163 aaKnown RBP23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 SCN3AQ9NY46 2000 aa23.25■■□□□ 1.31
DNMT3A-206ENST00000406659 ENO4A6NNW6 628 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 KIF1CO43896 1103 aaKnown RBP23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 GADD45GO95257 159 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 HMGN2P05204 90 aaKnown RBP23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 AGXTP21549 392 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 CD27P26842 260 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 GABARAPL2P60520 117 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 SNRPNP63162 240 aaKnown RBP23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 RUNX2Q13950 521 aa23.24■■□□□ 1.31
DNMT3A-206ENST00000406659 PUM1Q14671 1186 aaKnown RBP eCLIP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms