RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 SNX33Q8WV41 574 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 RADILQ96JH8 1075 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 IER2Q9BTL4 223 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 COLEC11Q9BWP8 271 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 NKX6-2Q9C056 277 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 AMBRA1Q9C0C7 1298 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SLIRPQ9GZT3 109 aaKnown RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 OR51B5Q9H339 312 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 CDCP1Q9H5V8 836 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 MAGIXQ9H6Y5 334 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 DZANK1Q9NVP4 752 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SPHK1Q9NYA1 384 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 TBX21Q9UL17 535 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 KLK4Q9Y5K2 254 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 TRBC2A0A5B9 178 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 FAM86C2PA6NEL3 165 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ERVH48-1M5A8F1 160 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SSX4O60224 188 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 GLUD1P00367 558 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 IFNA17P01571 189 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 S100A8P05109 93 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 FGF1P05230 155 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 CCL5P13501 91 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 CERS1P27544 350 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 CDH11P55287 796 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 PER3P56645 1201 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SLC35A2P78381 396 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 DSC2Q02487 901 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 DYRK1AQ13627 763 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 GPNMBQ14956 572 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 GTDC1Q4AE62 458 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 NKAPLQ5M9Q1 402 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 C9orf57Q5W0N0 161 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SLC22A10Q63ZE4 541 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 TMEM81Q6P7N7 255 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SLC39A5Q6ZMH5 540 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 MTSS1LQ765P7 747 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 RBFAQ8N0V3 343 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SIDT2Q8NBJ9 832 aaKnown RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 OR4F6Q8NGB9 312 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 OR4Q3Q8NH05 313 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 DNAJB3Q8WWF6 145 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 DNASE1L2Q92874 299 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ARL11Q969Q4 196 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SGK3Q96BR1 496 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 FCRL2Q96LA5 508 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 UHRF1Q96T88 793 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF649Q9BS31 505 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 DUSP26Q9BV47 211 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 VAPAQ9P0L0 249 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 MUTYHQ9UIF7 546 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 FBXL2Q9UKC9 423 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ARID1BQ8NFD5 2236 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 LOC285095A0A1B0GVY8 99 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 A0A1W2PPK0 400 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 HMX2A2RU54 273 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 OR2A25A4D2G3 310 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 GRXCR2A6NFK2 248 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 F5H5T6 163 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 I6L893 689 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 B3GAT3O94766 335 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 AGTR1P30556 359 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 GRK5P34947 590 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 RPS19P39019 145 aaKnown RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 CRISP1P54107 249 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 MANFP55145 182 aaKnown RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 OC90Q02509 493 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 PDZK1IP1Q13113 114 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SCGB2B2Q4G0G5 96 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 RAB6CQ53S08 254 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 VARS2Q5ST30 1063 aaKnown RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 METTL11BQ5VVY1 283 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 TIGD3Q6B0B8 471 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 GTF2IRD2BQ6EKJ0 949 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 XAF1Q6GPH4 301 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 NLRC3Q7RTR2 1065 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 FAM122BQ7Z309 247 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 GTF2IRD2Q86UP8 949 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 PDZD3Q86UT5 571 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 DCUN1D3Q8IWE4 304 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 KRTCAP2Q8N6L1 136 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ACVR1CQ8NER5 493 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 OR8J1Q8NGP2 316 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 GEMIN6Q8WXD5 167 aaKnown RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ACOT11Q8WXI4 607 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 EXOSC8Q96B26 276 aaKnown RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 FCRL1Q96LA6 429 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF300Q96RE9 604 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 WDR83Q9BRX9 315 aaKnown RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 RAB6CQ9H0N0 254 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 TMPRSS4Q9NRS4 437 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SMPD4Q9NXE4 827 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 TAS2R16Q9NYV7 291 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 NUDT4Q9NZJ9 180 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 PPP4R1LQ9P1A2 415 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 KIF26AQ9ULI4 1882 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF705GA8MUZ8 300 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-203ENST00000406072 SULT1C2O00338 296 aa5.59□□□□□ -1.51
HDAC9-203ENST00000406072 PPP6CO00743 305 aa5.59□□□□□ -1.51
HDAC9-203ENST00000406072 DPYSL4O14531 572 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms