RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 VEZF1Q14119 521 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 FAM214AQ32MH5 1076 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 SNAP47Q5SQN1 464 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 PERM1Q5SV97 790 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 FAM180BQ6P0A1 224 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 PRSS41Q7RTY9 318 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 ZZZ3Q8IYH5 903 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 C11orf65Q8NCR3 313 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 TANKQ92844 425 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 UCN3Q969E3 161 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 FAM162AQ96A26 154 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 C10orf90Q96M02 699 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 NUDT22Q9BRQ3 303 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 TRIM4Q9C037 500 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 CHST8Q9H2A9 424 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 LRRN3Q9H3W5 708 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 SIRT3Q9NTG7 399 aaPredicted RBP19.78■□□□□ 0.76
TPM1-208ENST00000404484 ARMC1Q9NVT9 282 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 ANAPC2Q9UJX6 822 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 TCRBV5S2A0A599 114 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 SGK494L7N484 410 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 RPLP0P05388 317 aaKnown RBP19.77■□□□□ 0.76
TPM1-208ENST00000404484 GP1BAP07359 652 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 CRATP43155 626 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 PTDSS1P48651 473 aaKnown RBP19.77■□□□□ 0.76
TPM1-208ENST00000404484 CDK9P50750 372 aaKnown RBP19.77■□□□□ 0.76
TPM1-208ENST00000404484 SNRPNP63162 240 aaKnown RBP19.77■□□□□ 0.76
TPM1-208ENST00000404484 OLR1P78380 273 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 INSM1Q01101 510 aaPredicted RBP19.77■□□□□ 0.76
TPM1-208ENST00000404484 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.77■□□□□ 0.76
TPM1-208ENST00000404484 GCNT6Q5T4J0 391 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 SAXO2Q658L1 398 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 LRRC74BQ6ZQY2 392 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 TMPRSS12Q86WS5 348 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 TMEM126BQ8IUX1 230 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 C10orf111Q8N326 155 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 GALNT15Q8N3T1 639 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 OR4D9Q8NGE8 314 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 OR9A4Q8NGU2 314 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 OR5AK3PQ8NH89 298 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 VCX3BQ9H321 246 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 EPS8L2Q9H6S3 715 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 TMEM9Q9P0T7 183 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 ACSL6Q9UKU0 697 aa19.77■□□□□ 0.76
TPM1-208ENST00000404484 FAF1Q9UNN5 650 aaPredicted RBP19.77■□□□□ 0.76
TPM1-208ENST00000404484 MRPS33Q9Y291 106 aaKnown RBP19.77■□□□□ 0.76
TPM1-208ENST00000404484 SCN3AQ9NY46 2000 aa19.77■□□□□ 0.75
TPM1-208ENST00000404484 TMEM150CB9EJG8 249 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 RDH16O75452 317 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 CREG1O75629 220 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 OR2B3O76000 313 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 RNH1P13489 461 aaKnown RBP19.76■□□□□ 0.75
TPM1-208ENST00000404484 PPP2R1BP30154 601 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 CCT3P49368 545 aaKnown RBP19.76■□□□□ 0.75
TPM1-208ENST00000404484 CCL7P80098 99 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 YOD1Q5VVQ6 348 aaPredicted RBP19.76■□□□□ 0.75
TPM1-208ENST00000404484 TLDC1Q6P9B6 456 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 RNF130Q86XS8 419 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 SLC30A8Q8IWU4 369 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 GPR135Q8IZ08 494 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 EID3Q8N140 333 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 CLEC4FQ8N1N0 589 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 LRRC25Q8N386 305 aaPredicted RBP19.76■□□□□ 0.75
TPM1-208ENST00000404484 CANT1Q8WVQ1 401 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 MVB12AQ96EY5 273 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 ZNF681Q96N22 645 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 CSF3RQ99062 836 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 TMEM38AQ9H6F2 299 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 THUMPD1Q9NXG2 353 aaKnown RBP19.76■□□□□ 0.75
TPM1-208ENST00000404484 PDP2Q9P2J9 529 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 FREM2Q5SZK8 3169 aa19.76■□□□□ 0.75
TPM1-208ENST00000404484 H0YIG0 161 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 CYR61O00622 381 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 CASC3O15234 703 aaKnown RBP19.75■□□□□ 0.75
TPM1-208ENST00000404484 CTSBP07858 339 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 FCGR1AP12314 374 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 BMP2P12643 396 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 PCGF2P35227 344 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 FEN1P39748 380 aaKnown RBP19.75■□□□□ 0.75
TPM1-208ENST00000404484 VHLP40337 213 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 PRIM2P49643 509 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 ANXA11P50995 505 aaKnown RBP19.75■□□□□ 0.75
TPM1-208ENST00000404484 MVDP53602 400 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 KCNAB1Q14722 419 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 TBCELQ5QJ74 424 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 HES3Q5TGS1 186 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 PTOV1Q86YD1 416 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 CCDC116Q8IYX3 515 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 ADGRG5Q8IZF4 528 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 OR56A1Q8NGH5 318 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 SUN3Q8TAQ9 357 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 CNTNAP3BQ96NU0 1288 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 TMEM121BQ9BXQ6 578 aaPredicted RBP19.75■□□□□ 0.75
TPM1-208ENST00000404484 UGT2B28Q9BY64 529 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 CNTNAP3Q9BZ76 1288 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 C3orf14Q9HBI5 128 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 OLAHQ9NV23 265 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 SERTAD3Q9UJW9 196 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 AURKCQ9UQB9 309 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 MAP4K5Q9Y4K4 846 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms