RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TRIM69Q86WT6 500 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 OR4N5Q8IXE1 308 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 SYT14Q8NB59 555 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 UBE2E3Q969T4 207 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 LGR4Q9BXB1 951 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 EGLN3Q9H6Z9 239 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 FABP12A6NFH5 140 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 PLD2O14939 933 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC31A1O15431 190 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 SERPINI2O75830 405 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 UQCRC2P22695 453 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 KCNC4Q03721 635 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 CAMK1Q14012 370 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 ZNF730Q6ZMV8 503 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 OR4K5Q8NGD3 323 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 DTD2Q96FN9 168 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 C16orf58Q96GQ5 468 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 MAPKAP1Q9BPZ7 522 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 HDHD5Q9BXW7 423 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 TP63Q9H3D4 680 aaPredicted RBP12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 NEK6Q9HC98 313 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 FZD3Q9NPG1 666 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 CHD7Q9P2D1 2997 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 KLHL42Q9P2K6 505 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 ANKMY1Q9P2S6 941 aa12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 CRNNQ9UBG3 495 aaPredicted RBP12.02□□□□□ -0.48
PPP4R1-202ENST00000400555 RB1P06400 928 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 CSTF2P33240 577 aaKnown RBP eCLIP12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 RPL3P39023 403 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 FADDQ13158 208 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 GPR19Q15760 415 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 SLC35F1Q5T1Q4 408 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 FAM71E1Q6IPT2 247 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 SLC9B2Q86UD5 537 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 SLC7A13Q8TCU3 470 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 SMPDL3AQ92484 453 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 POP5Q969H6 163 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 DEPDC7Q96QD5 511 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 TMEM245Q9H330 911 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 SMURF1Q9HCE7 757 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 SEC16AO15027 2179 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 FAM25AB3EWG3 89 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 FAM25CB3EWG5 89 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 FAM25GB3EWG6 89 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 ADRA2AP08913 450 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 ARAFP10398 606 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 FCHO2Q0JRZ9 810 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 KLHL12Q53G59 568 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 PSRC1Q6PGN9 363 aaPredicted RBP12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 TMEM107Q6UX40 140 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 ZCCHC10Q8TBK6 192 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 TMEM80Q96HE8 168 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 PITX2Q99697 317 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 TREX2Q9BQ50 279 aaPredicted RBP12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 H2AFY2Q9P0M6 372 aaPredicted RBP12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 MUTYHQ9UIF7 546 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 SLC9A8Q9Y2E8 581 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 PLEKHM1Q9Y4G2 1056 aa12.02□□□□□ -0.49
PPP4R1-202ENST00000400555 CYP17A1P05093 508 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 KELP23276 732 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 MAGEA8P43361 318 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 XCR1P46094 333 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 SOX9P48436 509 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 MVDP53602 400 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 SEC13P55735 322 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 ZNF91Q05481 1191 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 KHDRBS2Q5VWX1 349 aaKnown RBP12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 PODNL1Q6PEZ8 512 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 LAPTM4BQ86VI4 370 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 SMG7Q92540 1137 aaKnown RBP12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 ZBED6CLQ96FA7 236 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 DPH7Q9BTV6 452 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 NTNG1Q9Y2I2 539 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 CLCA3PQ9Y6N3 262 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 A0A1W2PS29 197 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 FFAR1O14842 300 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 TMPRSS11DO60235 418 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 NR2F6P10588 404 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 HOXB3P14651 431 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 HOXB9P17482 250 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 RBBP4Q09028 425 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 FBXO43Q4G163 708 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 ZNF57Q68EA5 555 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 TCTN3Q6NUS6 607 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 DPPA4Q7L190 304 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 TECPR1Q7Z6L1 1165 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 FCRL4Q96PJ5 515 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 GABARAPL3Q9BY60 117 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 RC3H2Q9HBD1 1191 aaKnown RBP12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 ZNF221Q9UK13 617 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 MAPRE3Q9UPY8 281 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 MRPS7Q9Y2R9 242 aaKnown RBP12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 TRPM6Q9BX84 2022 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 TMEM221A6NGB7 291 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 TRIM64BA6NI03 449 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 NPC1O15118 1278 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 HYAL3O43820 417 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 NCR1O76036 304 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 CLTBP09497 229 aa12.01□□□□□ -0.49
PPP4R1-202ENST00000400555 ADRB3P13945 408 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms