RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 GIMAP4Q9NUV9 329 aa16.49■□□□□ 0.23
CTNS-203ENST00000399306 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.49■□□□□ 0.23
CTNS-203ENST00000399306 COL6A6A6NMZ7 2263 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 C17orf105B2RV13 164 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 SDHDO14521 159 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 ZNF195O14628 629 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 OR10H2O60403 315 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 DDAH2O95865 285 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 FAM87AP0C7U9 286 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 TNNI3P19429 210 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 TACR1P25103 407 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 ALDH9A1P49189 494 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 PGDP52209 483 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 MAP4K2Q12851 820 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 PDE7AQ13946 482 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 IL23RQ5VWK5 629 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 ISLR2Q6UXK2 745 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 SPATA19Q7Z5L4 167 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 LRRC25Q8N386 305 aaPredicted RBP16.48■□□□□ 0.23
CTNS-203ENST00000399306 SLC5A8Q8N695 610 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 CNRIP1Q96F85 164 aaPredicted RBP16.48■□□□□ 0.23
CTNS-203ENST00000399306 SIKE1Q9BRV8 207 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 NUDT9Q9BW91 350 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 RNF32Q9H0A6 362 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 SLC25A18Q9H1K4 315 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 CXorf21Q9HAI6 301 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 SLCO1B3Q9NPD5 702 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 EXO1Q9UQ84 846 aaKnown RBP16.48■□□□□ 0.23
CTNS-203ENST00000399306 ENTPD4Q9Y227 616 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 CPAMD8Q8IZJ3 1885 aa16.48■□□□□ 0.23
CTNS-203ENST00000399306 OR6C76A6NM76 312 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 WASHC1A8K0Z3 465 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 ERAL1O75616 437 aaKnown RBP16.47■□□□□ 0.23
CTNS-203ENST00000399306 IGKV3-11P04433 115 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 ITGAMP11215 1152 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 PRPS1L1P21108 318 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 MPIP34949 423 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 IRX1P78414 480 aaPredicted RBP16.47■□□□□ 0.23
CTNS-203ENST00000399306 ID2Q02363 134 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 LACTB2Q53H82 288 aaPredicted RBP16.47■□□□□ 0.23
CTNS-203ENST00000399306 C6orf163Q5TEZ5 329 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 LIX1Q8N485 282 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 OR7G1Q8NGA0 311 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 SLC2A12Q8TD20 617 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 ZNF675Q8TD23 568 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 BRIX1Q8TDN6 353 aaKnown RBP16.47■□□□□ 0.23
CTNS-203ENST00000399306 RIT1Q92963 219 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 UCN3Q969E3 161 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 SENP5Q96HI0 755 aaPredicted RBP16.47■□□□□ 0.23
CTNS-203ENST00000399306 EGLN2Q96KS0 407 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 ZNF354BQ96LW1 612 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 KCNK13Q9HB14 408 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 COPS7AQ9UBW8 275 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 ATP6V1HQ9UI12 483 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 USH1CQ9Y6N9 552 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 ATRXP46100 2492 aa16.47■□□□□ 0.23
CTNS-203ENST00000399306 A6NL46 340 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 A8MUA0 341 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 MYO1GB0I1T2 1018 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 BCAS2O75934 225 aaPredicted RBP16.46■□□□□ 0.23
CTNS-203ENST00000399306 ZFAND5O76080 213 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 KITP10721 976 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 HPCAL1P37235 193 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 CLDN8P56748 225 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 FUT7Q11130 342 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 MFAP5Q13361 173 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 EPGNQ6UW88 154 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 CAMKMTQ7Z624 323 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 TICAM1Q8IUC6 712 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 GALNT12Q8IXK2 581 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 MMP21Q8N119 569 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 OR5L2Q8NGL0 311 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 CEP70Q8NHQ1 597 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 ZNF721Q8TF20 911 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 NCLNQ969V3 563 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 CTHRC1Q96CG8 243 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 TSSK3Q96PN8 268 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 PRPF18Q99633 342 aaKnown RBP16.46■□□□□ 0.23
CTNS-203ENST00000399306 DEFB126Q9BYW3 111 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 EPS8L2Q9H6S3 715 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 MARCOQ9UEW3 520 aaPredicted RBP16.46■□□□□ 0.23
CTNS-203ENST00000399306 GIMAP2Q9UG22 337 aa16.46■□□□□ 0.23
CTNS-203ENST00000399306 BSNQ9UPA5 3926 aa16.46■□□□□ 0.22
CTNS-203ENST00000399306 MASP2O00187 686 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 DPM1O60762 260 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 EDF1O60869 148 aaKnown RBP16.45■□□□□ 0.22
CTNS-203ENST00000399306 NTSP30990 170 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 FRKP42685 505 aaPredicted RBP16.45■□□□□ 0.22
CTNS-203ENST00000399306 MEP1AQ16819 746 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 PRICKLE4Q2TBC4 344 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 HSDL2Q6YN16 418 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 RIMKLAQ8IXN7 391 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 NUBPLQ8TB37 319 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 HAS2Q92819 552 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 PPWD1Q96BP3 646 aaKnown RBP16.45■□□□□ 0.22
CTNS-203ENST00000399306 ACSS1Q9NUB1 689 aaPredicted RBP16.45■□□□□ 0.22
CTNS-203ENST00000399306 ATAD3AQ9NVI7 634 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 ABI3Q9P2A4 366 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 BAIAP2L1Q9UHR4 511 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 ZNF639Q9UID6 485 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms