RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 C19orf25Q9UFG5 118 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 G3BP2Q9UN86 482 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 KMT2BQ9UMN6 2715 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 A0A0G2JND7 137 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MYO1GB0I1T2 1018 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 C9JVG2 144 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PEX12O00623 359 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ATP1B1P05026 303 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 LAMP1P11279 417 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CD1EP15812 388 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FRKP42685 505 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NME5P56597 212 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 UFM1P61960 85 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ACTN3Q08043 901 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 DUSP8Q13202 625 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TERF2Q15554 542 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 LINC00303Q3SY05 128 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PLAG1Q6DJT9 500 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ACAD11Q709F0 780 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 APLFQ8IW19 511 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PARP9Q8IXQ6 854 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TMEM102Q8N9M5 508 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SIMC1Q8NDZ2 872 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 C10orf82Q8WW14 230 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PSMF1Q92530 271 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TTC9Q92623 222 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CIDECQ96AQ7 238 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 COQ8BQ96D53 544 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MTERF3Q96E29 417 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CATSPER2Q96P56 530 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 DGAT2Q96PD7 388 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 LPAR4Q99677 370 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TUBB6Q9BUF5 446 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ING2Q9H160 280 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MIEF1Q9NQG6 463 aa11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SDR39U1Q9NRG7 319 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-203ENST00000399082 C17orf105B2RV13 164 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 UBDO15205 165 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CEACAM4O75871 244 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 IGKV3-11P04433 115 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 IFNA16P05015 189 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TROVE2P10155 538 aaKnown RBP eCLIP11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ITGAMP11215 1152 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PORP16435 677 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CSNK2A2P19784 350 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 EFNA1P20827 205 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PRPS1L1P21108 318 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 S1PR1P21453 382 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 GPX3P22352 226 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 GALNSP34059 522 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MRPL19P49406 292 aaKnown RBP11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 WNT3P56703 355 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SOX8P57073 446 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PHC1P78364 1004 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PLIN5Q00G26 463 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SPRED3Q2MJR0 410 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PRICKLE4Q2TBC4 344 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PDCD4Q53EL6 469 aaKnown RBP11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF628Q5EBL2 1059 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FAM111BQ6SJ93 734 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CAMKMTQ7Z624 323 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CCDC116Q8IYX3 515 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 LRRC25Q8N386 305 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 KIF2BQ8N4N8 673 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 OR9I1Q8NGQ6 314 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SLC2A12Q8TD20 617 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ELP5Q8TE02 316 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF721Q8TF20 911 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 EXTL1Q92935 676 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PPCDCQ96CD2 204 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FER1L6-AS2Q96M78 137 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 AMDHD1Q96NU7 426 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SIKE1Q9BRV8 207 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NUDT9Q9BW91 350 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SEMA4CQ9C0C4 833 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 GLIPR2Q9H4G4 154 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CLMPQ9H6B4 373 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CXorf21Q9HAI6 301 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MAT2BQ9NZL9 334 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 KLHL14Q9P2G3 628 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF639Q9UID6 485 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ERVK-11Q9UQG0 969 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 COPG1Q9Y678 874 aaKnown RBP11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ATMQ13315 3056 aa11.57□□□□□ -0.56
HLA-DQB1-203ENST00000399082 GMNCA6NCL1 334 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SYNDIG1LA6NDD5 238 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PDPK1O15530 556 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PRKNO60260 465 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 OR10H2O60403 315 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SCN2BO60939 215 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SERPINA7P05543 415 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 IDO1P14902 403 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PCSK2P16519 638 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 HPCAL1P37235 193 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PGDP52209 483 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 AIMP2Q13155 320 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 GSTA3Q16772 222 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 BTBD16Q32M84 506 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SPANXN4Q5MJ08 99 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FHL5Q5TD97 284 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms