RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 A0A1B0GTH9 108 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 WASHC1A8K0Z3 465 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 HRKO00198 91 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 P04436 131 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 KLK1P06870 262 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 SBK3P0C264 359 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 SLC35E2P0CK97 266 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 TSPAN8P19075 237 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 AGAP20933 346 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 CNR1P21554 472 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 PIK3R1P27986 724 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 HTR1EP28566 365 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 GALNSP34059 522 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 PTGS2P35354 604 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 PPIAP62937 165 aaKnown RBP12.4□□□□□ -0.42
VCX3A-202ENST00000398729 HERVK_113P63132 956 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 ERVK-8P63133 956 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 ADORA2A-AS1P86434 159 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 SLC29A2Q14542 456 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF267Q14586 743 aaPredicted RBP12.4□□□□□ -0.42
VCX3A-202ENST00000398729 CMPK2Q5EBM0 449 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 CCNYL2Q5T2Q4 361 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 LETMD1Q6P1Q0 360 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 ARHGAP11AQ6P4F7 1023 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 PAOXQ6QHF9 649 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 RNF111Q6ZNA4 994 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 RGS9BPQ6ZS82 235 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 RPS27LQ71UM5 84 aaKnown RBP12.4□□□□□ -0.42
VCX3A-202ENST00000398729 SLC29A4Q7RTT9 530 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 SLC22A16Q86VW1 577 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 DOLPP1Q86YN1 238 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 CHERPQ8IWX8 916 aaKnown RBP12.4□□□□□ -0.42
VCX3A-202ENST00000398729 C9orf40Q8IXQ3 194 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 SLC15A4Q8N697 577 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 AGAP11Q8TF27 550 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 SELENOMQ8WWX9 145 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 FAM173AQ9BQD7 235 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 ERVK-6Q9BXR3 956 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 MRPL1Q9BYD6 325 aaKnown RBP12.4□□□□□ -0.42
VCX3A-202ENST00000398729 TRIM8Q9BZR9 551 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 BRF2Q9HAW0 419 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 SACM1LQ9NTJ5 587 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
VCX3A-202ENST00000398729 TEX10Q9NXF1 929 aaPredicted RBP12.4□□□□□ -0.42
VCX3A-202ENST00000398729 TMEM216Q9P0N5 145 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 FETUBQ9UGM5 382 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 ITGB1BP2Q9UKP3 347 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 SLC12A4Q9UP95 1085 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 ERVK-19Q9WJR5 959 aa12.4□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF469Q96JG9 3925 aaPredicted RBP12.4□□□□□ -0.43
VCX3A-202ENST00000398729 OR6C76A6NM76 312 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 E9PLN8 166 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 G3V3Y1 287 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 PPP6CO00743 305 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 PGRMC2O15173 223 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 ZNHIT1O43257 154 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 ZNF354AO60765 605 aaPredicted RBP12.39□□□□□ -0.43
VCX3A-202ENST00000398729 GUCY1B2O75343 617 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 SUPT7LO94864 414 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 TPOP07202 933 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 FAM153BP0C7A2 387 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 PTGER4P35408 488 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 HSD17B3P37058 310 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 MAPK12P53778 367 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 KRTAP10-9P60411 292 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 CLCQ05315 142 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 TBL3Q12788 808 aaKnown RBP12.39□□□□□ -0.43
VCX3A-202ENST00000398729 FAM153CQ494X1 144 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 NDUFAF5Q5TEU4 345 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 FAM47EQ6ZV65 393 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 GDF7Q7Z4P5 450 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 FGD2Q7Z6J4 655 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 DND1Q8IYX4 353 aaKnown RBP12.39□□□□□ -0.43
VCX3A-202ENST00000398729 METTL4Q8N3J2 472 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 OR4K14Q8NGD5 310 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 OR52N2Q8NGI0 321 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 FAM57AQ8TBR7 257 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 ACMSDQ8TDX5 336 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 TRPC4APQ8TEL6 797 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 DOK4Q8TEW6 326 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 PHF10Q8WUB8 498 aaKnown RBP12.39□□□□□ -0.43
VCX3A-202ENST00000398729 UCN3Q969E3 161 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 GAL3ST4Q96RP7 486 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 VKORC1Q9BQB6 163 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 TTTY12Q9BZ98 90 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 TXLNGYQ9BZA5 131 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 DEFB127Q9H1M4 99 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 CHST11Q9NPF2 352 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 PLSCR2Q9NRY7 297 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 FARSBQ9NSD9 589 aaKnown RBP12.39□□□□□ -0.43
VCX3A-202ENST00000398729 NMRK1Q9NWW6 199 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 PSMC3IPQ9P2W1 217 aaPredicted RBP12.39□□□□□ -0.43
VCX3A-202ENST00000398729 TRPS1Q9UHF7 1281 aa12.39□□□□□ -0.43
VCX3A-202ENST00000398729 EML6Q6ZMW3 1958 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 DNHD1Q96M86 4753 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 NCOA6Q14686 2063 aaPredicted RBP12.38□□□□□ -0.43
VCX3A-202ENST00000398729 A0A0G2JMM0 328 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 A0A1B0GTL3 188 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 A0A1W2PPB8 328 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 A0A1W2PRS3 328 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms