RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 HRNRQ86YZ3 2850 aaPredicted RBP11.06□□□□□ -0.64
TFF3-202ENST00000398431 HSPB2A8KAH6 182 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 AHRRA9YTQ3 701 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 TRIM3O75382 744 aaPredicted RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 LRATO95237 230 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 EPPINO95925 133 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 UQCRC1P31930 480 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 RPL21P46778 160 aaKnown RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 TRPC1P48995 793 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 SLC12A2P55011 1212 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 SLC37A1P57057 533 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 KCNJ2P63252 427 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 ADAM8P78325 824 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 CRYZQ08257 329 aaKnown RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 DUSP8Q13202 625 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 BIKQ13323 160 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 DAZAP2Q15038 168 aaPredicted RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 ZKSCAN8Q15776 578 aaPredicted RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 HSPB2Q16082 182 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 FBXL19-AS1Q494R0 122 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 PAGE2BQ5JRK9 111 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 FNDC7Q5VTL7 733 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 KHDRBS2Q5VWX1 349 aaKnown RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 MED27Q6P2C8 311 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 CAPN12Q6ZSI9 719 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 CHSY3Q70JA7 882 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 ZBED8Q8IZ13 594 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 MMP21Q8N119 569 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 MMGT1Q8N4V1 131 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 GOLGA6L1Q8N7Z2 621 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 CHDHQ8NE62 594 aaPredicted RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 C7orf57Q8NEG2 295 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 SLC22A8Q8TCC7 542 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 TANKQ92844 425 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 NTNG2Q96CW9 530 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 CMTM7Q96FZ5 175 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 TIMP4Q99727 224 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 ZNF717Q9BY31 904 aaPredicted RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 FUT8Q9BYC5 575 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 TRIM31Q9BZY9 425 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 PHACTR1Q9C0D0 580 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 ANKZF1Q9H8Y5 726 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 CNIH4Q9P003 139 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 CBLCQ9ULV8 474 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 BOKQ9UMX3 212 aaPredicted RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 SNX24Q9Y343 169 aa11.05□□□□□ -0.64
TFF3-202ENST00000398431 ANKHD1Q8IWZ3 2542 aaKnown RBP11.05□□□□□ -0.64
TFF3-202ENST00000398431 A0A1W2PR48 441 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ANKRD33BA6NCL7 494 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 A6NNC1 897 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 FAM47E-STBD1D6RA91 191 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 PLPP1O14494 284 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 RAD51CO43502 376 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ACSL3O95573 720 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 RHOXF2BP0C7M4 288 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 PCNAP12004 261 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 MTHFD2P13995 350 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 COX7A2P14406 83 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ALOX15P16050 662 aaPredicted RBP11.04□□□□□ -0.64
TFF3-202ENST00000398431 STMN1P16949 149 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 TIMP3P35625 211 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 SSR2P43308 183 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ZNF136P52737 540 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 HERVK_113P63132 956 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ERVK-8P63133 956 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 TBL3Q12788 808 aaKnown RBP11.04□□□□□ -0.64
TFF3-202ENST00000398431 ZNF267Q14586 743 aaPredicted RBP11.04□□□□□ -0.64
TFF3-202ENST00000398431 NTRK2Q16620 822 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 SPRED3Q2MJR0 410 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 FLYWCH1Q4VC44 716 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 MRM1Q6IN84 353 aaKnown RBP11.04□□□□□ -0.64
TFF3-202ENST00000398431 TMEM64Q6YI46 380 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 CYS1Q717R9 158 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 LRRC70Q7Z2Q7 622 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 GPR180Q86V85 440 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ST13P4Q8IZP2 240 aaPredicted RBP11.04□□□□□ -0.64
TFF3-202ENST00000398431 ZCCHC7Q8N3Z6 543 aaKnown RBP11.04□□□□□ -0.64
TFF3-202ENST00000398431 ZNF441Q8N8Z8 693 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 FAM222BQ8WU58 562 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 RNASE6Q93091 150 aaKnown RBP11.04□□□□□ -0.64
TFF3-202ENST00000398431 TSPAN17Q96FV3 270 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ATOH8Q96SQ7 321 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 RBBP8Q99708 897 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 RHOXF2Q9BQY4 288 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ERVK-6Q9BXR3 956 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 WWTR1Q9GZV5 400 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 EPB41L4BQ9H329 900 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 UBQLN3Q9H347 655 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 VIPAS39Q9H9C1 493 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 MED4Q9NPJ6 270 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 MS4A12Q9NXJ0 267 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 RNF112Q9ULX5 631 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ERVK-19Q9WJR5 959 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 ASB4Q9Y574 426 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 SPACA6W5XKT8 324 aa11.04□□□□□ -0.64
TFF3-202ENST00000398431 MED12Q93074 2177 aa11.03□□□□□ -0.64
TFF3-202ENST00000398431 IQANK1A0A1B0GTG1 560 aa11.03□□□□□ -0.64
TFF3-202ENST00000398431 A0A1W2PS29 197 aa11.03□□□□□ -0.64
TFF3-202ENST00000398431 FAM187AA6NFU0 413 aa11.03□□□□□ -0.64
TFF3-202ENST00000398431 FAM159BA6NKW6 160 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms