RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 MYO1DO94832 1006 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 HEXBP07686 556 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 CELA2AP08217 269 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 IGFBP2P18065 325 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 STXBP1P61764 594 aaKnown RBP12.78□□□□□ -0.36
SEC13-205ENST00000397101 PMP22Q01453 160 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 RELAQ04206 551 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 TGM3Q08188 693 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 GARNL3Q5VVW2 1013 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 H3F3CQ6NXT2 135 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 MEX3BQ6ZN04 569 aaKnown RBP12.78□□□□□ -0.36
SEC13-205ENST00000397101 MAVSQ7Z434 540 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 TRIM46Q7Z4K8 759 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 OR4N4Q8N0Y3 316 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 CEP70Q8NHQ1 597 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 ZCCHC10Q8TBK6 192 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 SCMH1Q96GD3 660 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 SEC16BQ96JE7 1060 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 ZNF354BQ96LW1 612 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 C3orf30Q96M34 536 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 OR2A5Q96R48 311 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 F2RL3Q96RI0 385 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 EBF4Q9BQW3 602 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 SARGQ9BW04 601 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 ACPTQ9BZG2 426 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 AKTIPQ9H8T0 292 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 LRTM1Q9HBL6 345 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 TNFRSF10DQ9UBN6 386 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 TSC22D4Q9Y3Q8 395 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 SERTM1A2A2V5 107 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 SNX3O60493 162 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 RSL1D1O76021 490 aaKnown RBP12.77□□□□□ -0.37
SEC13-205ENST00000397101 WISP2O76076 250 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 SERPINA6P08185 405 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 ALOX15P16050 662 aaPredicted RBP12.77□□□□□ -0.37
SEC13-205ENST00000397101 LBPP18428 481 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 NCF2P19878 526 aaPredicted RBP12.77□□□□□ -0.37
SEC13-205ENST00000397101 RPL38P63173 70 aaKnown RBP12.77□□□□□ -0.37
SEC13-205ENST00000397101 ALDH6A1Q02252 535 aaKnown RBP12.77□□□□□ -0.37
SEC13-205ENST00000397101 ACSM2AQ08AH3 577 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 PWP1Q13610 501 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 NDUFA9Q16795 377 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 AP5B1Q2VPB7 878 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 DEPDC1Q5TB30 811 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 KHDRBS2Q5VWX1 349 aaKnown RBP12.77□□□□□ -0.37
SEC13-205ENST00000397101 ACSM2BQ68CK6 577 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 PLAG1Q6DJT9 500 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 VN1R5Q7Z5H4 357 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 SIAH3Q8IW03 269 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 FNDC5Q8NAU1 212 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 MDS2Q8NDY4 140 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 SRFBP1Q8NEF9 429 aaKnown RBP12.77□□□□□ -0.37
SEC13-205ENST00000397101 OR2T11Q8NH01 316 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 NT5CQ8TCD5 201 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 CREB3L4Q8TEY5 395 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 RGMAQ96B86 450 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 DMRTA2Q96SC8 542 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 CCDC28BQ9BUN5 200 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 MS4A8Q9BY19 250 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 REXO4Q9GZR2 422 aaKnown RBP12.77□□□□□ -0.37
SEC13-205ENST00000397101 COPS7BQ9H9Q2 264 aaPredicted RBP12.77□□□□□ -0.37
SEC13-205ENST00000397101 C1orf109Q9NX04 203 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 PSD3Q9NYI0 1048 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 TRPC4Q9UBN4 977 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 GIMAP2Q9UG22 337 aa12.77□□□□□ -0.37
SEC13-205ENST00000397101 A0A0G2JN53 185 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 E9PBE3 544 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 ZNF195O14628 629 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 ERI3O43414 337 aaKnown RBP12.76□□□□□ -0.37
SEC13-205ENST00000397101 ASNA1O43681 348 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 CD99P14209 185 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 MAPK1P28482 360 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 ART1P52961 327 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 PLA2G16P53816 162 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 RAB8AP61006 207 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 SRSF11Q05519 484 aaKnown RBP12.76□□□□□ -0.37
SEC13-205ENST00000397101 MAD2L1Q13257 205 aaPredicted RBP12.76□□□□□ -0.37
SEC13-205ENST00000397101 CUL3Q13618 768 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 RPS6KA2Q15349 733 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 HKDC1Q2TB90 917 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 LSM12Q3MHD2 195 aaKnown RBP12.76□□□□□ -0.37
SEC13-205ENST00000397101 TMEM35AQ53FP2 167 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 XKR7Q5GH72 579 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 RNF165Q6ZSG1 346 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 Q6ZSR9 355 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 ABHD13Q7L211 337 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 VN1R4Q7Z5H5 301 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 GHDCQ8N2G8 530 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 ANKS4BQ8N8V4 417 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 AMER3Q8N944 861 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 TMEM178AQ8NBL3 297 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 KCT2Q8NC54 265 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 CCDC197Q8NCU1 140 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 ACTRT2Q8TDY3 377 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 CA5BP1Q8WTZ4 195 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 C10orf82Q8WW14 230 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 APIPQ96GX9 242 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 FRMD6Q96NE9 622 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms