RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZNF763Q0D2J5 394 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 KLRB1Q12918 225 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 BIKQ13323 160 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 PRSS53Q2L4Q9 553 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 FAM47EQ6ZV65 393 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 LRRC34Q8IZ02 419 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 ST13P4Q8IZP2 240 aaPredicted RBP15.42■□□□□ 0.06
CXCL1-201ENST00000395761 ZADH2Q8N4Q0 377 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 MORN4Q8NDC4 146 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 CATSPER1Q8NEC5 780 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 SLC2A12Q8TD20 617 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 ZNF721Q8TF20 911 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 DAZLQ92904 295 aaKnown RBP15.42■□□□□ 0.06
CXCL1-201ENST00000395761 VMP1Q96GC9 406 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 METTL2AQ96IZ6 378 aaKnown RBP15.42■□□□□ 0.06
CXCL1-201ENST00000395761 EGLN2Q96KS0 407 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 FCRL1Q96LA6 429 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 CDCP1Q9H5V8 836 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 SPTA1P02549 2419 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 B8ZZF3 427 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 PEX11AO75192 247 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 ERAL1O75616 437 aaKnown RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 WDPCPO95876 746 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 CPMP14384 443 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 COX7A2P14406 83 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 DRD2P14416 443 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 PTGER1P34995 402 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 FEN1P39748 380 aaKnown RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 CLCN2P51788 898 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 DUSP2Q05923 314 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 C2orf80Q0P641 193 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 PDCD2Q16342 344 aaPredicted RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 PLEKHN1Q494U1 663 aaPredicted RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 ACER2Q5QJU3 275 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 ABHD17BQ5VST6 288 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 FAM71E1Q6IPT2 247 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 RPS19BP1Q86WX3 136 aaKnown RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 HPS6Q86YV9 775 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 WDR75Q8IWA0 830 aaKnown RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 BEST3Q8N1M1 668 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 C7orf57Q8NEG2 295 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 OR1N1Q8NGS0 311 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 THAP3Q8WTV1 239 aaPredicted RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 TM9SF4Q92544 642 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 RIT1Q92963 219 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 KLHL29Q96CT2 875 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 SENP5Q96HI0 755 aaPredicted RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 PPP1R36Q96LQ0 422 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 ZNF354BQ96LW1 612 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 ZNF681Q96N22 645 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 DEFB126Q9BYW3 111 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 EPS8L2Q9H6S3 715 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 LIN28AQ9H9Z2 209 aaKnown RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 LUZP4Q9P127 313 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 BAIAP2L1Q9UHR4 511 aa15.41■□□□□ 0.06
CXCL1-201ENST00000395761 EXO1Q9UQ84 846 aaKnown RBP15.41■□□□□ 0.06
CXCL1-201ENST00000395761 ZNF195O14628 629 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 HDAC3O15379 428 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 SUV39H1O43463 412 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 CT62P0C5K7 136 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 PORP16435 677 aaPredicted RBP15.4■□□□□ 0.06
CXCL1-201ENST00000395761 C19orf57Q0VDD7 668 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 ZNF267Q14586 743 aaPredicted RBP15.4■□□□□ 0.06
CXCL1-201ENST00000395761 HEPACAMQ14CZ8 416 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 MEP1AQ16819 746 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 SLC6A19Q695T7 634 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 C16orf47Q6ZP98 133 aaPredicted RBP15.4■□□□□ 0.06
CXCL1-201ENST00000395761 SLC5A8Q8N695 610 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 EXOSC8Q96B26 276 aaKnown RBP15.4■□□□□ 0.06
CXCL1-201ENST00000395761 C19orf60Q96EN9 201 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 CNRIP1Q96F85 164 aaPredicted RBP15.4■□□□□ 0.06
CXCL1-201ENST00000395761 PPP3R2Q96LZ3 170 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 PELOQ9BRX2 385 aaKnown RBP15.4■□□□□ 0.06
CXCL1-201ENST00000395761 CNPPD1Q9BV87 410 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 CXorf21Q9HAI6 301 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 MYNNQ9NPC7 610 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 PFDN4Q9NQP4 134 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 FGFR1OP2Q9NVK5 253 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 TEKT2Q9UIF3 430 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 UTS2RQ9UKP6 389 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 PSME2Q9UL46 239 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 COL6A6A6NMZ7 2263 aa15.4■□□□□ 0.06
CXCL1-201ENST00000395761 TMEM200CA6NKL6 621 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 ZFAND5O76080 213 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 IGKV3-11P04433 115 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 SDC1P18827 310 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 CSNK2A2P19784 350 aaPredicted RBP15.39■□□□□ 0.05
CXCL1-201ENST00000395761 DDCP20711 480 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 GALNSP34059 522 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 GSTM5P46439 218 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 SEC24CP53992 1094 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 MLF1P58340 268 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 ERVK-8P63133 956 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 ARG2P78540 354 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 C6orf136Q5SQH8 315 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 Q6ZS92 163 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 TICAM1Q8IUC6 712 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 Q8NA96 180 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 CLHC1Q8NHS4 586 aa15.39■□□□□ 0.05
CXCL1-201ENST00000395761 STON2Q8WXE9 905 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms