RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 NUF2Q9BZD4 464 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 EPS8L2Q9H6S3 715 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 LIN28AQ9H9Z2 209 aaKnown RBP18.55■□□□□ 0.56
SNCA-203ENST00000394986 BAIAP2L1Q9UHR4 511 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 EXO1Q9UQ84 846 aaKnown RBP18.55■□□□□ 0.56
SNCA-203ENST00000394986 DOCK10Q96BY6 2186 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 DPM1O60762 260 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 CT62P0C5K7 136 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 KITP10721 976 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 DRD2P14416 443 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 PORP16435 677 aaPredicted RBP18.54■□□□□ 0.56
SNCA-203ENST00000394986 ERVK-8P63133 956 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 KLRB1Q12918 225 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 ATP6AP1LQ52LC2 224 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 ACER2Q5QJU3 275 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 C6orf136Q5SQH8 315 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 ABHD17BQ5VST6 288 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 IGFL3Q6UXB1 125 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 HOMEZQ8IX15 550 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 BEST3Q8N1M1 668 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 SLC5A8Q8N695 610 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 OR1N1Q8NGS0 311 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 ZNF721Q8TF20 911 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 RIT1Q92963 219 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 SENP5Q96HI0 755 aaPredicted RBP18.54■□□□□ 0.56
SNCA-203ENST00000394986 CCT7Q99832 543 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 PELOQ9BRX2 385 aaKnown RBP18.54■□□□□ 0.56
SNCA-203ENST00000394986 CDCP1Q9H5V8 836 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 PFDN4Q9NQP4 134 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 ERVK-19Q9WJR5 959 aa18.54■□□□□ 0.56
SNCA-203ENST00000394986 LRATO95237 230 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 WDPCPO95876 746 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 BCKDHAP12694 445 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 DDCP20711 480 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 BIKQ13323 160 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 LTB4RQ15722 352 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 SLC6A19Q695T7 634 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 C16orf47Q6ZP98 133 aaPredicted RBP18.53■□□□□ 0.56
SNCA-203ENST00000394986 TICAM1Q8IUC6 712 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 ZADH2Q8N4Q0 377 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 FNDC5Q8NAU1 212 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 CATSPER1Q8NEC5 780 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 DYDC1Q8WWB3 177 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 TM9SF4Q92544 642 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 ZNF354BQ96LW1 612 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 ZNF681Q96N22 645 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 LMF1Q96S06 567 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 INTS9Q9NV88 658 aaKnown RBP18.53■□□□□ 0.56
SNCA-203ENST00000394986 STMN3Q9NZ72 180 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 TEKT2Q9UIF3 430 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 TMED5Q9Y3A6 229 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 ZNF780BQ9Y6R6 833 aa18.53■□□□□ 0.56
SNCA-203ENST00000394986 KLF11O14901 512 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 AKAP10O43572 662 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 IGKV3-11P04433 115 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 NT5EP21589 574 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 GSTM5P46439 218 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 SPRED3Q2MJR0 410 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 ANKRD26P1Q6NSI1 321 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 RPS19BP1Q86WX3 136 aaKnown RBP18.52■□□□□ 0.56
SNCA-203ENST00000394986 GALNT12Q8IXK2 581 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 LIX1Q8N485 282 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 FBXL20Q96IG2 436 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 AKTIPQ9H8T0 292 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 CXorf21Q9HAI6 301 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 MIEF1Q9NQG6 463 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 ANKRD10Q9NXR5 420 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 PSME2Q9UL46 239 aa18.52■□□□□ 0.56
SNCA-203ENST00000394986 TMEM200CA6NKL6 621 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 DYRK3O43781 588 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 CLPSP04118 112 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 CSNK2A2P19784 350 aaPredicted RBP18.51■□□□□ 0.55
SNCA-203ENST00000394986 SSTR4P31391 388 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 ARG2P78540 354 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 MEP1AQ16819 746 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 FAM111BQ6SJ93 734 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 HSDL2Q6YN16 418 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 IKBIPQ70UQ0 350 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 HPS6Q86YV9 775 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 LRRC25Q8N386 305 aaPredicted RBP18.51■□□□□ 0.55
SNCA-203ENST00000394986 C7orf57Q8NEG2 295 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 ADCY4Q8NFM4 1077 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 LRRC8CQ8TDW0 803 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 BRINP2Q9C0B6 783 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 SLCO1B3Q9NPD5 702 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 SLC35C2Q9NQQ7 365 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 COPS7AQ9UBW8 275 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 ENTPD4Q9Y227 616 aa18.51■□□□□ 0.55
SNCA-203ENST00000394986 DYTNA2CJ06 578 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 GABRR3A8MPY1 467 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 ATP1B1P05026 303 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 GALNSP34059 522 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 SOX18P35713 384 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 MLF1P58340 268 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 RNF4P78317 190 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 PTGR1Q14914 329 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 PLEKHN1Q494U1 663 aaPredicted RBP18.5■□□□□ 0.55
SNCA-203ENST00000394986 IL23RQ5VWK5 629 aa18.5■□□□□ 0.55
SNCA-203ENST00000394986 WDR75Q8IWA0 830 aaKnown RBP18.5■□□□□ 0.55
SNCA-203ENST00000394986 C9orf40Q8IXQ3 194 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms