RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 NDUFB11Q9NX14 153 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 SPATA7Q9P0W8 599 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 HYKKA2RU49 373 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 A6NL46 340 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 C5orf58C9J3I9 102 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 OR10H3O60404 316 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 XPAP23025 273 aaPredicted RBP17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 XKP51811 444 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 DCST1Q5T197 706 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 SAXO2Q658L1 398 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 TRIM69Q86WT6 500 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 OR4D11Q8NGI4 311 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 ING5Q8WYH8 240 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 NEURL3Q96EH8 262 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 MRGPRX3Q96LB0 322 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 DHRS1Q96LJ7 313 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 WFDC6Q9BQY6 131 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 TSSK6Q9BXA6 273 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 RACGAP1Q9H0H5 632 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 SLC35F4A4IF30 521 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 HEPACAM2A8MVW5 462 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 H3BN98 237 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 TPST2O60704 377 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 LILRB5O75023 590 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 CYP17A1P05093 508 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 ELFN1P0C7U0 828 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 TYRP14679 529 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 MMP12P39900 470 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 GRIN2CQ14957 1233 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 ARMC4Q5T2S8 1044 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 MFSD4BQ5TF39 518 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 PGBD2Q6P3X8 592 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 FAM92BQ6ZTR7 304 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 GATAD2AQ86YP4 633 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 TCEANCQ8N8B7 351 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 ST6GAL2Q96JF0 529 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 ZSWIM3Q96MP5 696 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 POLR2J2Q9GZM3 115 aaKnown RBP17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 IL36AQ9UHA7 158 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 RPL36Q9Y3U8 105 aaKnown RBP17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 NOX1Q9Y5S8 564 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 ANKDD1BA6NHY2 528 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 FAAHO00519 579 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 IL7P13232 177 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 ITGB7P26010 798 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 CASP12Q6UXS9 341 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 DEF8Q6ZN54 512 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 SLC9B2Q86UD5 537 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 RAB43Q86YS6 212 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 CELF5Q8N6W0 485 aaKnown RBP17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 RAB8BQ92930 207 aa17.4■□□□□ 0.38
PCDHA1-202ENST00000394633 TP53P04637 393 aaPredicted RBP17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 H1F0P07305 194 aaKnown RBP17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 MLLT11Q13015 90 aaPredicted RBP17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 LARS2Q15031 903 aaKnown RBP17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 ZNF805Q5CZA5 627 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 PHC2Q8IXK0 858 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 ADGRF3Q8IZF5 1079 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 GALNT6Q8NCL4 622 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 PROKR2Q8NFJ6 384 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 OR8J1Q8NGP2 316 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 IRF7Q92985 503 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 ABCG4Q9H172 646 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 POLR2J3Q9H1A7 115 aaKnown RBP17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 TIGARQ9NQ88 270 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 CMAHPQ9Y471 501 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 IQCMA0A1B0GVH7 501 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 A0A1W2PQ09 198 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 FAM172BPA6NC97 362 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 A8MV72 311 aaPredicted RBP17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 B4GALT2O60909 372 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 SOD1P00441 154 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 CEBPBP17676 345 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 MXD1Q05195 221 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 OCLNQ16625 522 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 LIPKQ5VXJ0 399 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 RNLSQ5VYX0 342 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 TMIGD1Q6UXZ0 262 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 TRAPPC5Q8IUR0 188 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 IQCF1Q8N6M8 205 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 SNX18Q96RF0 628 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 FUZQ9BT04 418 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 LINC00597Q9H2U6 94 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 EPHX3Q9H6B9 360 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 SLC28A3Q9HAS3 691 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 DDX28Q9NUL7 540 aaKnown RBP17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 SSR3Q9UNL2 185 aa17.39■□□□□ 0.37
PCDHA1-202ENST00000394633 LINC00854A0A1B0GVQ3 168 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 PLPP1O14494 284 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 HNRNPA1P09651 372 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 DDOSTP39656 456 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 HEPACAMQ14CZ8 416 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 TAB1Q15750 504 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 C2orf73Q8N5S3 287 aaPredicted RBP17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 OR5P2Q8WZ92 322 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 IL17FQ96PD4 163 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 OR2AG1Q9H205 316 aa17.38■□□□□ 0.37
PCDHA1-202ENST00000394633 SEMA3GQ9NS98 782 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms