RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 ZNF552Q9H707 407 aaPredicted RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 AKTIPQ9H8T0 292 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 MEAF6Q9HAF1 191 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 MIEF1Q9NQG6 463 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 SLC35C2Q9NQQ7 365 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 GIMAP4Q9NUV9 329 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 PNPOQ9NVS9 261 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF451Q9Y4E5 1061 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 POLR3HQ9Y535 204 aaPredicted RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 PTGDR2Q9Y5Y4 395 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 PRRC2CQ9Y520 2896 aaKnown RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 MED13Q9UHV7 2174 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 IGHV3-20A0A0C4DH32 117 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 GLOD5A6NK44 160 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 A6NL46 340 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 OR6C76A6NM76 312 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 WASHC1A8K0Z3 465 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 A8MUA0 341 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 C17orf105B2RV13 164 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 TGFBR3LH3BV60 316 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 POLR3GO15318 223 aaPredicted RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ERAL1O75616 437 aaKnown RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 BCAS2O75934 225 aaPredicted RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 DNAJB5O75953 348 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ZFAND5O76080 213 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ATP1B1P05026 303 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 IFI6P09912 130 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 FAM87AP0C7U9 286 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 KITP10721 976 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 CPMP14384 443 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 LBPP18428 481 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 SDC1P18827 310 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 PRPS1L1P21108 318 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 MDH1P40925 334 aaKnown RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ALDH9A1P49189 494 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 PGDP52209 483 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ERVK-8P63133 956 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 IRX1P78414 480 aaPredicted RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 Q0VFX4 171 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 MAP4K2Q12851 820 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 C6orf163Q5TEZ5 329 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 IL23RQ5VWK5 629 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 FAM219BQ5XKK7 198 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 OGFOD2Q6N063 350 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 PCSK4Q6UW60 755 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 IGFL2Q6UWQ7 119 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 IGFL3Q6UXB1 125 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ISLR2Q6UXK2 745 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 SPATA19Q7Z5L4 167 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ARMC10Q8N2F6 343 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 LRRC25Q8N386 305 aaPredicted RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 SLC5A8Q8N695 610 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 EXD3Q8N9H8 876 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 APCDD1LQ8NCL9 501 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 OR7G1Q8NGA0 311 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 OR5L2Q8NGL0 311 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 OR1N1Q8NGS0 311 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 CEP70Q8NHQ1 597 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 C9orf43Q8TAL5 461 aaPredicted RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ACTRT2Q8TDY3 377 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 STON2Q8WXE9 905 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 PSMF1Q92530 271 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 RIT1Q92963 219 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 KLHL29Q96CT2 875 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 CNRIP1Q96F85 164 aaPredicted RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 SENP5Q96HI0 755 aaPredicted RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 FBXL20Q96IG2 436 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 MAELQ96JY0 434 aaKnown RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 EGLN2Q96KS0 407 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF681Q96N22 645 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 BBS4Q96RK4 519 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 MESP1Q9BRJ9 268 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 SIKE1Q9BRV8 207 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 EBPLQ9BY08 206 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 DEFB126Q9BYW3 111 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 NUF2Q9BZD4 464 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 SEMA4CQ9C0C4 833 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 REEP4Q9H6H4 257 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 EPS8L2Q9H6S3 715 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 KCNK13Q9HB14 408 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 STMN3Q9NZ72 180 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 NOP53Q9NZM5 478 aaKnown RBP6.31□□□□□ -1.4
UBBP1-201ENST00000392399 HEY2Q9UBP5 337 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 COPS7AQ9UBW8 275 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 UTS2RQ9UKP6 389 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ENTPD4Q9Y227 616 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 CFL2Q9Y281 166 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 CNTRLQ7Z7A1 2325 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 ATRXP46100 2492 aa6.31□□□□□ -1.4
UBBP1-201ENST00000392399 NUP210LQ5VU65 1888 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 SCN2AQ99250 2005 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 A8MUI8 341 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 MYO1GB0I1T2 1018 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 SDHDO14521 159 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF195O14628 629 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 DPM1O60762 260 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 PRKRAO75569 313 aaKnown RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 DDAH2O95865 285 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms