RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SLC16A5O15375 505 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 B3GALT2O43825 422 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 OSMP13725 252 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 TIA1P31483 386 aaKnown RBP eCLIP18.85■□□□□ 0.61
SHANK1-203ENST00000391813 PLEKHN1Q494U1 663 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-203ENST00000391813 ABCA11PQ4W5N1 156 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 ATAD3CQ5T2N8 411 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 BEST3Q8N1M1 668 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 NETO1Q8TDF5 533 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 ZNF700Q9H0M5 742 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 ERVK-19Q9WJR5 959 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 A3GALT2U3KPV4 340 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 COL18A1P39060 1754 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 TNFSF8P32971 234 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 PGDP52209 483 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 PGGT1BP53609 377 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 CNIH2Q6PI25 160 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 HDHD5Q9BXW7 423 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 ZNF436Q9C0F3 470 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-203ENST00000391813 OR51B5Q9H339 312 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 MYNNQ9NPC7 610 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 POU2F3Q9UKI9 436 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 UTS2RQ9UKP6 389 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 MMP20O60882 483 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 GPR32O75388 356 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 RPP14O95059 124 aaKnown RBP18.84■□□□□ 0.61
SHANK1-203ENST00000391813 TGM6O95932 706 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 TBX18O95935 607 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 GNSP15586 552 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 KCNA5P22460 613 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 AKT2P31751 481 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 EIF2S3P41091 472 aaKnown RBP18.84■□□□□ 0.61
SHANK1-203ENST00000391813 BLKP51451 505 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 WNT4P56705 351 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 MOAP1Q96BY2 351 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 ARMC5Q96C12 935 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 MCHR1Q99705 422 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 COQ3Q9NZJ6 369 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 MYH11P35749 1972 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 C1orf196B1AJZ1 125 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 GPR68Q15743 365 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 RANBP10Q6VN20 620 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 POGLUT1Q8NBL1 392 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 SMPDL3AQ92484 453 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 C20orf27Q9GZN8 174 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 LOC100509620A0A075B734 347 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 SLC22A31A6NKX4 558 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 EIF1AYO14602 144 aaKnown RBP18.84■□□□□ 0.61
SHANK1-203ENST00000391813 MAFKO60675 156 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 BMPR1AP36894 532 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 EIF1AXP47813 144 aaKnown RBP18.84■□□□□ 0.61
SHANK1-203ENST00000391813 TXNDC8Q6A555 127 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 OR2AP1Q8NGE2 309 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 CRYGNQ8WXF5 182 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 ELMOD3Q96FG2 381 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 C7orf50Q9BRJ6 194 aaKnown RBP18.84■□□□□ 0.61
SHANK1-203ENST00000391813 NANSQ9NR45 359 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 NAP1L6A6NFF2 107 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 GTF2F2P13984 249 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 ZNF30P17039 623 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 UPP1Q16831 310 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 VITQ6UXI7 678 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 SLC5A11Q8WWX8 675 aa18.84■□□□□ 0.61
SHANK1-203ENST00000391813 FUBP1Q96AE4 644 aaKnown RBP18.84■□□□□ 0.61
SHANK1-203ENST00000391813 BAZ2AQ9UIF9 1905 aaKnown RBP18.84■□□□□ 0.61
SHANK1-203ENST00000391813 ACOT8O14734 319 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 ZNF821O75541 412 aaPredicted RBP18.83■□□□□ 0.61
SHANK1-203ENST00000391813 SEC14L2O76054 403 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 CLDN7O95471 211 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 ITGBL1O95965 494 aaPredicted RBP18.83■□□□□ 0.61
SHANK1-203ENST00000391813 CYB5AP00167 134 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 EVI2BP34910 448 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 VAMP2P63027 116 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 MICAQ29983 383 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 CARD16Q5EG05 197 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 EOGTQ5NDL2 527 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 OR52E4Q8NGH9 312 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 CNOT9Q92600 299 aaKnown RBP18.83■□□□□ 0.61
SHANK1-203ENST00000391813 OR51J1Q9H342 316 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 CDH7Q9ULB5 785 aa18.83■□□□□ 0.61
SHANK1-203ENST00000391813 SLC35F4A4IF30 521 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 NARSO43776 548 aaKnown RBP18.83■□□□□ 0.6
SHANK1-203ENST00000391813 JUPP14923 745 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 CSKP41240 450 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 S100A10P60903 97 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 HACD4Q5VWC8 232 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 BRAT1Q6PJG6 821 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 GRASPQ7Z6J2 395 aaPredicted RBP18.83■□□□□ 0.6
SHANK1-203ENST00000391813 JAGN1Q8N5M9 183 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 ADAMTS16Q8TE57 1224 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 TMEM168Q9H0V1 697 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 ABCD2Q9UBJ2 740 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 GPR45Q9Y5Y3 372 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 GABARAPO95166 117 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF33BQ06732 778 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 ARSKQ6UWY0 536 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 SYT14Q8NB59 555 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 GTF2H4Q92759 462 aa18.83■□□□□ 0.6
SHANK1-203ENST00000391813 WRAP53Q9BUR4 548 aaKnown RBP18.83■□□□□ 0.6
SHANK1-203ENST00000391813 MRPS30Q9NP92 439 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms