RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TMPRSS9Q7Z410 1059 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF717Q9BY31 904 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-202ENST00000380518 MAB21L2Q9Y586 359 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 MYH2Q9UKX2 1941 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 SLC1A7O00341 560 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 SOCS2O14508 198 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 PRKYO43930 277 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 KIAA0513O60268 411 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 ARHGEF15O94989 841 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 ANXA3P12429 323 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 OXTRP30559 389 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 SLC25A25Q6KCM7 469 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 TMEM107Q6UX40 140 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 SCRN2Q96FV2 425 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 BIRC8Q96P09 236 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 HAPLN2Q9GZV7 340 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 IFT172Q9UG01 1749 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 GXYLT2A0PJZ3 443 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 RNGTTO60942 597 aaKnown RBP15.34■□□□□ 0.05
COL2A1-202ENST00000380518 CDC123O75794 336 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-202ENST00000380518 ADAP00813 363 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 BMP2P12643 396 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 RBMXP38159 391 aaKnown RBP15.34■□□□□ 0.05
COL2A1-202ENST00000380518 NAA10P41227 235 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF81P51508 661 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 C1orf94Q6P1W5 598 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 GPAT4Q86UL3 456 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 TSPYL5Q86VY4 417 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-202ENST00000380518 Q8N402 240 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 RPLP0P6Q8NHW5 317 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 DAZLQ92904 295 aaKnown RBP15.34■□□□□ 0.05
COL2A1-202ENST00000380518 GSKIPQ9P0R6 139 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 WASF3Q9UPY6 502 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 G3V2L1 256 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 H2BFMP0C1H6 154 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 C6P13671 934 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 KCNJ5P48544 419 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 CD97P48960 835 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 CLRN1P58418 232 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 ERVPABLB-1P60509 514 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 RPS26P62854 115 aaKnown RBP15.34■□□□□ 0.05
COL2A1-202ENST00000380518 OR52N2Q8NGI0 321 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 OR5J2Q8NH18 312 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 SGTBQ96EQ0 304 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 SAMD11Q96NU1 681 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 PDLIM7Q9NR12 457 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 A0A1W2PPL8 197 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 ANHXE9PGG2 379 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 RTCAO00442 366 aaKnown RBP15.33■□□□□ 0.05
COL2A1-202ENST00000380518 SMAD9O15198 467 aaKnown RBP15.33■□□□□ 0.05
COL2A1-202ENST00000380518 PENKP01210 267 aaPredicted RBP15.33■□□□□ 0.05
COL2A1-202ENST00000380518 ETFAP13804 333 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 AK4P27144 223 aaPredicted RBP15.33■□□□□ 0.05
COL2A1-202ENST00000380518 HTR6P50406 440 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 C22orf42Q6IC83 251 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 ENPP6Q6UWR7 440 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 LRRN1Q6UXK5 716 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 BAIAP2L2Q6UXY1 529 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 ASRGL1Q7L266 308 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 METTL27Q8N6F8 245 aaPredicted RBP15.33■□□□□ 0.05
COL2A1-202ENST00000380518 CSNK1A1LQ8N752 337 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 POGLUT1Q8NBL1 392 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 PDE7BQ9NP56 450 aa15.33■□□□□ 0.05
COL2A1-202ENST00000380518 APBB3O95704 486 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 ZNF806P0C7X5 589 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 NOVP48745 357 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 ZNF33BQ06732 778 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 DHCR24Q15392 516 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 TMEM69Q5SWH9 247 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 APCDD1Q8J025 514 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 OR8S1Q8NH09 359 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 TRUB1Q8WWH5 349 aaKnown RBP15.33■□□□□ 0.04
COL2A1-202ENST00000380518 POTEKPQ9BYX7 375 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 VNN3Q9NY84 501 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 EPHA6Q9UF33 1036 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 ACSL6Q9UKU0 697 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 CLCA1A8K7I4 914 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 NME4O00746 187 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 EEF1E1O43324 174 aaKnown RBP15.33■□□□□ 0.04
COL2A1-202ENST00000380518 GABBR2O75899 941 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 PORP16435 677 aaPredicted RBP15.33■□□□□ 0.04
COL2A1-202ENST00000380518 CCNOP22674 350 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 GSTM2P28161 218 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 WNT7BP56706 349 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 ACTA2P62736 377 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 ACTG2P63267 376 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 OR4C11Q6IEV9 310 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 ARHGAP11AQ6P4F7 1023 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 OR5T2Q8NGG2 359 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 CRYGNQ8WXF5 182 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 SLC12A9Q9BXP2 914 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 SDR39U1Q9NRG7 319 aaPredicted RBP15.33■□□□□ 0.04
COL2A1-202ENST00000380518 IQCF3P0C7M6 154 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 GTF2F2P13984 249 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 MYF6P23409 242 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 FRKP42685 505 aaPredicted RBP15.33■□□□□ 0.04
COL2A1-202ENST00000380518 PLCXD2Q0VAA5 305 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL2A1-202ENST00000380518 TIGD4Q8IY51 512 aa15.33■□□□□ 0.04
COL2A1-202ENST00000380518 NAXEQ8NCW5 288 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms