RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 IGFBP6P24592 240 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-202ENST00000379446 GSSP48637 474 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 FAPQ12884 760 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 ZBTB6Q15916 424 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 PPP1R3AQ16821 1122 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 CMPK2Q5EBM0 449 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 THOC6Q86W42 341 aaKnown RBP6.23□□□□□ -1.41
NEDD9-202ENST00000379446 KIF18BQ86Y91 864 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 SLC35F3Q8IY50 421 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 PGAM4Q8N0Y7 254 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF619Q8N2I2 560 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 CBR4Q8N4T8 237 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 PNPT1Q8TCS8 783 aaKnown RBP6.23□□□□□ -1.41
NEDD9-202ENST00000379446 ISG20Q96AZ6 181 aaKnown RBP6.23□□□□□ -1.41
NEDD9-202ENST00000379446 DHRS1Q96LJ7 313 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 ALOXE3Q9BYJ1 711 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 NAA50Q9GZZ1 169 aaKnown RBP6.23□□□□□ -1.41
NEDD9-202ENST00000379446 IL21Q9HBE4 155 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 CLEC4EQ9ULY5 219 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 VDAC3Q9Y277 283 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 CAB39Q9Y376 341 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-202ENST00000379446 TMED5Q9Y3A6 229 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 PLEKHM1Q9Y4G2 1056 aa6.23□□□□□ -1.41
NEDD9-202ENST00000379446 ANKUB1A6NFN9 424 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PRR19A6NJB7 356 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 C17orf105B2RV13 164 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 E7ENX8 843 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 G3V2L1 256 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 INMTO95050 263 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ALBP02768 609 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CSRP1P21291 193 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PRDX3P30048 256 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ISXQ2M1V0 245 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 INTS11Q5TA45 600 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 FAM219BQ5XKK7 198 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 LARP4Q71RC2 724 aaKnown RBP eCLIP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 GALNT10Q86SR1 603 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ALDH16A1Q8IZ83 802 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 C19orf47Q8N9M1 422 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 NAXEQ8NCW5 288 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 OR4C6Q8NH72 309 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CCL4L1Q8NHW4 92 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TMEM234Q8WY98 164 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ZBED6CLQ96FA7 236 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TDRD1Q9BXT4 1180 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TRIM8Q9BZR9 551 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 C6orf62Q9GZU0 229 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 UCKL1Q9NWZ5 548 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CARD8Q9Y2G2 431 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 MAP4K5Q9Y4K4 846 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PCDHGA3Q9Y5H0 932 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 SPTY2D1-AS1A0A0U1RR47 76 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 BPIP17213 487 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 IFNGR2P38484 337 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 MAGEA6P43360 314 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 NXPH1P58417 271 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 MAT1AQ00266 395 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 MS4A2Q01362 244 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 GSTM4Q03013 218 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 RPE65Q16518 533 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PAQR3Q6TCH7 311 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 THAP5Q7Z6K1 395 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 VANGL1Q8TAA9 524 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 SUN5Q8TC36 379 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 HDAC2Q92769 488 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ISOC1Q96CN7 298 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TRMT61AQ96FX7 289 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 MRPL48Q96GC5 212 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 MSLNLQ96KJ4 702 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF607Q96SK3 696 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 MRPL57Q9BQC6 102 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 BRF2Q9HAW0 419 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PNPLA3Q9NST1 481 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 KLF13Q9Y2Y9 288 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PMF1-BGLAPU3KQ54 211 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 IGHV3-20A0A0C4DH32 117 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ZCWPW2A0A1B0GU75 182 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TNFRSF10CO14798 259 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 AURKAO14965 403 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 SMAD7O15105 426 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PDPK1O15530 556 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CCNB2O95067 398 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CCL4P13236 92 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 IFI30P13284 250 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CD68P34810 354 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 MAGEA3P43357 314 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 DNASE1L1P49184 302 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 GFERP55789 205 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 DPYSQ14117 519 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 NKPD1Q17RQ9 610 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PM20D1Q6GTS8 502 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 OR5M10Q6IEU7 315 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 DEF8Q6ZN54 512 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TMPRSS7Q7RTY8 843 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 SLC15A3Q8IY34 581 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 GPR137CQ8N3F9 429 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TMEM102Q8N9M5 508 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 OR9A4Q8NGU2 314 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CNTNAP3BQ96NU0 1288 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CNTNAP3Q9BZ76 1288 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms