RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 EXOSC8Q96B26 276 aaKnown RBP17.47■□□□□ 0.39
SSU72-203ENST00000378725 VMP1Q96GC9 406 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 SENP5Q96HI0 755 aaPredicted RBP17.47■□□□□ 0.39
SSU72-203ENST00000378725 AGAP4Q96P64 663 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 LMF1Q96S06 567 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 REEP4Q9H6H4 257 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 WDR55Q9H6Y2 383 aaPredicted RBP17.47■□□□□ 0.39
SSU72-203ENST00000378725 CXorf21Q9HAI6 301 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 MIEF1Q9NQG6 463 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 ZNF223Q9UK11 482 aaPredicted RBP17.47■□□□□ 0.39
SSU72-203ENST00000378725 SCN2AQ99250 2005 aa17.47■□□□□ 0.39
SSU72-203ENST00000378725 MGAQ8IWI9 3026 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 GABRR3A8MPY1 467 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 TCP11X1B4DZS4 312 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 K7EM74 188 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 DYRK3O43781 588 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 EDF1O60869 148 aaKnown RBP17.46■□□□□ 0.39
SSU72-203ENST00000378725 PDGFAP04085 211 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 IGKV3-11P04433 115 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 G6PDP11413 515 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 EPHA3P29320 983 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 CLCN2P51788 898 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 C21orf58P58505 322 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 DUSP2Q05923 314 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 MAP4K2Q12851 820 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 LY6DQ14210 128 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 SLC9B1Q4ZJI4 515 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 FAM180BQ6P0A1 224 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 IGFL2Q6UWQ7 119 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 FAM47EQ6ZV65 393 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 SPATA19Q7Z5L4 167 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 ARMC10Q8N2F6 343 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 KIF2BQ8N4N8 673 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 C9orf43Q8TAL5 461 aaPredicted RBP17.46■□□□□ 0.39
SSU72-203ENST00000378725 GFM2Q969S9 779 aaKnown RBP17.46■□□□□ 0.39
SSU72-203ENST00000378725 MTERF3Q96E29 417 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 CCDC134Q9H6E4 229 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 KCNK13Q9HB14 408 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 ATP6V1HQ9UI12 483 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 ZNF451Q9Y4E5 1061 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 ITPR1Q14643 2758 aa17.46■□□□□ 0.39
SSU72-203ENST00000378725 GOLGA8QA0A0J9YX86 632 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 GOLGA8OA6NCC3 632 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 MYO1GB0I1T2 1018 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 GOLGA8NF8WBI6 632 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 AKAP10O43572 662 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 LRATO95237 230 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 ALPPP05187 535 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 PCSK2P16519 638 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 SOX18P35713 384 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 MDH1P40925 334 aaKnown RBP17.45■□□□□ 0.38
SSU72-203ENST00000378725 PGDP52209 483 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 DIO3P55073 304 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 CLDN8P56748 225 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 GUCY1A3Q02108 690 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 MGAT2Q10469 447 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 PTGR1Q14914 329 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 PRICKLE4Q2TBC4 344 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 IGFL3Q6UXB1 125 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 R3HCC1LQ7Z5L2 792 aaKnown RBP17.45■□□□□ 0.38
SSU72-203ENST00000378725 HPS6Q86YV9 775 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 RIMKLAQ8IXN7 391 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 CCDC116Q8IYX3 515 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 LRRC25Q8N386 305 aaPredicted RBP17.45■□□□□ 0.38
SSU72-203ENST00000378725 ZNF321PQ8N8H1 164 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 OR8K3Q8NH51 312 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 CLHC1Q8NHS4 586 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 SUN3Q8TAQ9 357 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 CTHRC1Q96CG8 243 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 FBXL20Q96IG2 436 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 ART5Q96L15 291 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 OR8D2Q9GZM6 311 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 SLC25A18Q9H1K4 315 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 GIMAP4Q9NUV9 329 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 PTGFRNQ9P2B2 879 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 ZNF639Q9UID6 485 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 TP53TG5Q9Y2B4 290 aa17.45■□□□□ 0.38
SSU72-203ENST00000378725 HRKO00198 91 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 CT62P0C5K7 136 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 PRPS1L1P21108 318 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 S1PR1P21453 382 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 NT5EP21589 574 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 MPIP34949 423 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 RPL3P39023 403 aaKnown RBP17.44■□□□□ 0.38
SSU72-203ENST00000378725 FUT7Q11130 342 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 MFAP5Q13361 173 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 ZNF267Q14586 743 aaPredicted RBP17.44■□□□□ 0.38
SSU72-203ENST00000378725 MPEG1Q2M385 716 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 LACTB2Q53H82 288 aaPredicted RBP17.44■□□□□ 0.38
SSU72-203ENST00000378725 B3GNTL1Q67FW5 361 aaPredicted RBP17.44■□□□□ 0.38
SSU72-203ENST00000378725 ISLR2Q6UXK2 745 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 GALNT12Q8IXK2 581 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 LGI4Q8N135 537 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 SIRT6Q8N6T7 355 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 CEP70Q8NHQ1 597 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 ZNF354BQ96LW1 612 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 NPAS2Q99743 824 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 DEFB126Q9BYW3 111 aa17.44■□□□□ 0.38
SSU72-203ENST00000378725 ZBTB20Q9HC78 741 aaPredicted RBP17.44■□□□□ 0.38
SSU72-203ENST00000378725 ENTPD4Q9Y227 616 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms