RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 SPNS1Q9H2V7 528 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 RHBGQ9H310 441 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 LRBAP50851 2863 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 TRBC2A0A5B9 178 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 UBDO15205 165 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 CYC1P08574 325 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 PRF1P14222 555 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 PCSK2P16519 638 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 ERVK-8P63133 956 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 PHEXP78562 749 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 MEF2AQ02078 507 aaPredicted RBP12.86□□□□□ -0.35
PRPF18-202ENST00000378572 MAD2L1Q13257 205 aaPredicted RBP12.86□□□□□ -0.35
PRPF18-202ENST00000378572 NSDHLQ15738 373 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 MEP1AQ16819 746 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 C6orf136Q5SQH8 315 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 SHISA5Q8N114 240 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 SLC5A8Q8N695 610 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 TTLQ8NG68 377 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 ITLN2Q8WWU7 325 aaPredicted RBP12.86□□□□□ -0.35
PRPF18-202ENST00000378572 LPAR4Q99677 370 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 CCDC106Q9BWC9 280 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 ACPTQ9BZG2 426 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 ABCA12Q86UK0 2595 aa12.86□□□□□ -0.35
PRPF18-202ENST00000378572 OR1F1O43749 312 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 SLC19A2O60779 497 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 CD46P15529 392 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 NCF2P19878 526 aaPredicted RBP12.85□□□□□ -0.35
PRPF18-202ENST00000378572 GRNP28799 593 aaKnown RBP12.85□□□□□ -0.35
PRPF18-202ENST00000378572 CA7P43166 264 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 SCTRP47872 440 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 NEK2P51955 445 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 OR4D2P58180 307 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 SKP1P63208 163 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 OLR1P78380 273 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 ALDH6A1Q02252 535 aaKnown RBP12.85□□□□□ -0.35
PRPF18-202ENST00000378572 EMX2Q04743 252 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 TUBA3CQ13748 450 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 KRT72Q14CN4 511 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 OR1C1Q15619 314 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 GSTA3Q16772 222 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.35
PRPF18-202ENST00000378572 GALNTL6Q49A17 601 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 SGO1Q5FBB7 561 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 TUBA3EQ6PEY2 450 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 RPTNQ6XPR3 784 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 YTHDF3Q7Z739 585 aaKnown RBP12.85□□□□□ -0.35
PRPF18-202ENST00000378572 FAM98AQ8NCA5 519 aaKnown RBP12.85□□□□□ -0.35
PRPF18-202ENST00000378572 OR5T3Q8NGG3 340 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 HUS1BQ8NHY5 278 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 TSLPQ969D9 159 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 CMTM7Q96FZ5 175 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 HBEGFQ99075 208 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 DMRT3Q9NQL9 472 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 NMRK1Q9NWW6 199 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 C1orf109Q9NX04 203 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 ASIC5Q9NY37 505 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 TMED5Q9Y3A6 229 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 GABRR3A8MPY1 467 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 CAPN14A8MX76 684 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 PEX11AO75192 247 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 ALDOCP09972 364 aaKnown RBP12.85□□□□□ -0.35
PRPF18-202ENST00000378572 PCNAP12004 261 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 COX6B1P14854 86 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 HTR1EP28566 365 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 AHRP35869 848 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 HMGCS1Q01581 520 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 RGS1Q08116 209 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 ART3Q13508 389 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 SQLEQ14534 574 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 HERC3Q15034 1050 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 AP5B1Q2VPB7 878 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 TMEM198Q66K66 360 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 PDSS2Q86YH6 399 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 ZNF808Q8N4W9 903 aaPredicted RBP12.85□□□□□ -0.35
PRPF18-202ENST00000378572 HORMAD2Q8N7B1 307 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 MFSD9Q8NBP5 474 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 ZNF740Q8NDX6 193 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 MTFMTQ96DP5 389 aaKnown RBP12.85□□□□□ -0.35
PRPF18-202ENST00000378572 SIGLEC12Q96PQ1 595 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 HES7Q9BYE0 225 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 LRTM1Q9HBL6 345 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 TMEM45AQ9NWC5 275 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 VPS29Q9UBQ0 182 aa12.85□□□□□ -0.35
PRPF18-202ENST00000378572 MYO7BQ6PIF6 2116 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 ANKDD1BA6NHY2 528 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 MAGEB17A8MXT2 336 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 NPIPA5E9PKD4 350 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 LCMT2O60294 686 aaKnown RBP12.84□□□□□ -0.35
PRPF18-202ENST00000378572 B4GALT2O60909 372 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 CLEC3AO75596 197 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 IDO1P14902 403 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 JAK1P23458 1154 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 KIAA0040Q15053 153 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 DEFB134Q4QY38 66 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 CCDC121Q6ZUS5 278 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.35
PRPF18-202ENST00000378572 ANKRD53Q8N9V6 530 aa12.84□□□□□ -0.35
PRPF18-202ENST00000378572 FNDC5Q8NAU1 212 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms