RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 H3BQF6 201 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 COPEO14579 308 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 PGRMC2O15173 223 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 ASNA1O43681 348 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 ESRRBO95718 433 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 PROCP04070 461 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 CRHR1P34998 444 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 CA7P43166 264 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 GPR85P60893 370 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 TRA2BP62995 288 aaKnown RBP15.58■□□□□ 0.08
HMGN4-201ENST00000377575 TBL3Q12788 808 aaKnown RBP15.58■□□□□ 0.08
HMGN4-201ENST00000377575 ZNF267Q14586 743 aaPredicted RBP15.58■□□□□ 0.08
HMGN4-201ENST00000377575 TCHHL1Q5QJ38 904 aaPredicted RBP15.58■□□□□ 0.08
HMGN4-201ENST00000377575 MTFR2Q6P444 385 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 BNC2Q6ZN30 1099 aaPredicted RBP15.58■□□□□ 0.08
HMGN4-201ENST00000377575 SH2D5Q6ZV89 423 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 GALNT12Q8IXK2 581 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 RIBC1Q8N443 379 aaPredicted RBP15.58■□□□□ 0.08
HMGN4-201ENST00000377575 C1orf52Q8N6N3 182 aaKnown RBP15.58■□□□□ 0.08
HMGN4-201ENST00000377575 CCNYL1Q8N7R7 359 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 GBP7Q8N8V2 638 aaPredicted RBP15.58■□□□□ 0.08
HMGN4-201ENST00000377575 CCDC63Q8NA47 563 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 SGCZQ96LD1 299 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 GAL3ST4Q96RP7 486 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 FAIM2Q9BWQ8 316 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 GSTO2Q9H4Y5 243 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 MID2Q9UJV3 735 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 GTF3C1Q12789 2109 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 MYO7BQ6PIF6 2116 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 NBPF19A0A087WUL8 3843 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 G3V2L1 256 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 HRKO00198 91 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 PLIN3O60664 434 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 KRT4P19013 534 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 VSNL1P62760 191 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 ASPHQ12797 758 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 SPIN4Q56A73 249 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 PIGGQ5H8A4 983 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 CFAP157Q5JU67 520 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 DND1Q8IYX4 353 aaKnown RBP15.57■□□□□ 0.08
HMGN4-201ENST00000377575 SLC15A4Q8N697 577 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 ZFP62Q8NB50 900 aaPredicted RBP15.57■□□□□ 0.08
HMGN4-201ENST00000377575 AGAP11Q8TF27 550 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 WWTR1Q9GZV5 400 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 CXorf21Q9HAI6 301 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 MID1IP1Q9NPA3 183 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 MCM8Q9UJA3 840 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 SH3BGRL2Q9UJC5 107 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 PCDHA9Q9Y5H5 950 aa15.57■□□□□ 0.08
HMGN4-201ENST00000377575 WASHC1A8K0Z3 465 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 FOXO6A8MYZ6 492 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 ACOT7O00154 380 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 CCL21O00585 134 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 ZG16O60844 167 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 SLU7O95391 586 aaKnown RBP15.56■□□□□ 0.08
HMGN4-201ENST00000377575 CLDN1O95832 211 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 P04436 131 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 NUDT17P0C025 328 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 CPMP14384 443 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 ABOP16442 354 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 DEKP35659 375 aaKnown RBP15.56■□□□□ 0.08
HMGN4-201ENST00000377575 RFC3P40938 356 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 XKP51811 444 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 SLC37A1P57057 533 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 DNAJB13P59910 316 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 IFFO1Q0D2I5 559 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 EBPQ15125 230 aaKnown RBP15.56■□□□□ 0.08
HMGN4-201ENST00000377575 RNFT1Q5M7Z0 435 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 SLC48A1Q6P1K1 146 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 Q6ZPB1 254 aaPredicted RBP15.56■□□□□ 0.08
HMGN4-201ENST00000377575 GK5Q6ZS86 529 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 FRMD7Q6ZUT3 714 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 SPPL2CQ8IUH8 684 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 C16orf52Q8NHV5 167 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 UCN3Q969E3 161 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 ACPTQ9BZG2 426 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 IQCGQ9H095 443 aaKnown RBP15.56■□□□□ 0.08
HMGN4-201ENST00000377575 SACM1LQ9NTJ5 587 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 PSME2Q9UL46 239 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 EXPH5Q8NEV8 1989 aa15.56■□□□□ 0.08
HMGN4-201ENST00000377575 PCDH7O60245 1069 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 ZNF500O60304 480 aaPredicted RBP15.55■□□□□ 0.08
HMGN4-201ENST00000377575 CRCPO75575 148 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 WISP2O76076 250 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 PORP16435 677 aaPredicted RBP15.55■□□□□ 0.08
HMGN4-201ENST00000377575 NT5EP21589 574 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 HTR6P50406 440 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 PLGLB1Q02325 96 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 SLC18A2Q05940 514 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 ACSM2AQ08AH3 577 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 ZNF750Q32MQ0 723 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 ACSM2BQ68CK6 577 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 EMBQ6PCB8 327 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 RGS9BPQ6ZS82 235 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 TAGAPQ8N103 731 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 C4orf33Q8N1A6 199 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 OR2M7Q8NG81 312 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 DOK4Q8TEW6 326 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 CHTF18Q8WVB6 975 aa15.55■□□□□ 0.08
HMGN4-201ENST00000377575 TM4SF18Q96CE8 201 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms