RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 CACUL1Q86Y37 369 aa16.3■□□□□ 0.2
TRIM27-201ENST00000377194 VANGL1Q8TAA9 524 aaPredicted RBP16.3■□□□□ 0.2
TRIM27-201ENST00000377194 REPS1Q96D71 796 aa16.3■□□□□ 0.2
TRIM27-201ENST00000377194 OR52A5Q9H2C5 316 aa16.3■□□□□ 0.2
TRIM27-201ENST00000377194 TM7SF3Q9NS93 570 aa16.3■□□□□ 0.2
TRIM27-201ENST00000377194 RABL2AQ9UBK7 228 aaPredicted RBP16.3■□□□□ 0.2
TRIM27-201ENST00000377194 HCN2Q9UL51 889 aa16.3■□□□□ 0.2
TRIM27-201ENST00000377194 CFAP20Q9Y6A4 193 aaKnown RBP16.3■□□□□ 0.2
TRIM27-201ENST00000377194 DOCK9Q9BZ29 2069 aa16.3■□□□□ 0.2
TRIM27-201ENST00000377194 C17orf113A0A1B0GUU1 675 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 CCDC182A6NF36 153 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 B8ZZF3 427 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 UGT2B17O75795 530 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 C9P02748 559 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 ITGA1P56199 1179 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 C2orf80Q0P641 193 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 FAPQ12884 760 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 MED22Q15528 200 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 ZNF79Q15937 498 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 FAM205BPQ63HN1 556 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 GLCCI1Q86VQ1 547 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 AMIGO1Q86WK6 493 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.29■□□□□ 0.24e-6■□□□□ 11.2
TRIM27-201ENST00000377194 C16orf78Q8WTQ4 265 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 ASB16Q96NS5 453 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 CNPPD1Q9BV87 410 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 LGR4Q9BXB1 951 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 BHLHE41Q9C0J9 482 aaPredicted RBP16.29■□□□□ 0.2
TRIM27-201ENST00000377194 PLCXD1Q9NUJ7 323 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 KIAA1549LQ6ZVL6 1849 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 GRXCR1A8MXD5 290 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 C5orf67F2Z3F1 127 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 SUV39H1O43463 412 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 TSC22D2O75157 780 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 MYL9P24844 172 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 GGT2P36268 569 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 P2RY2P41231 377 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 ST3GAL4Q11206 333 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 HYAL2Q12891 473 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 NUMA1Q14980 2115 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 FBXO46Q6PJ61 603 aaPredicted RBP16.29■□□□□ 0.2
TRIM27-201ENST00000377194 ERN2Q76MJ5 926 aaKnown RBP16.29■□□□□ 0.2
TRIM27-201ENST00000377194 FAM124AQ86V42 546 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 CACTIN-AS1Q8N1I8 211 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 OR5AK3PQ8NH89 298 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 ASB15Q8WXK1 588 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 TRMT61AQ96FX7 289 aaKnown RBP16.29■□□□□ 0.2
TRIM27-201ENST00000377194 COL21A1Q96P44 957 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 GON7Q9BXV9 100 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 B3GNT4Q9C0J1 378 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 DPEP2Q9H4A9 486 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 FKBP14Q9NWM8 211 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 ZNF282Q9UDV7 671 aaPredicted RBP16.29■□□□□ 0.2
TRIM27-201ENST00000377194 GPR34Q9UPC5 381 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 V9GYH0 126 aa16.29■□□□□ 0.2
TRIM27-201ENST00000377194 TNFRSF21O75509 655 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 TBX6O95947 436 aaPredicted RBP16.28■□□□□ 0.2
TRIM27-201ENST00000377194 PCGF2P35227 344 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 C11orf65Q8NCR3 313 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 GOT1L1Q8NHS2 421 aaPredicted RBP16.28■□□□□ 0.2
TRIM27-201ENST00000377194 ZFAND1Q8TCF1 268 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 SLC35A5Q9BS91 424 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 GABARAPL3Q9BY60 117 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 GOLGA4Q13439 2230 aaKnown RBP16.28■□□□□ 0.2
TRIM27-201ENST00000377194 ADRA2AP08913 450 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 PSKH1P11801 424 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 POU3F3P20264 500 aaPredicted RBP16.28■□□□□ 0.2
TRIM27-201ENST00000377194 TIE1P35590 1138 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 CNTN1Q12860 1018 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 PDE7AQ13946 482 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 FBXO43Q4G163 708 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 TMEM52BQ4KMG9 183 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 FAM71E1Q6IPT2 247 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 FGF13Q92913 245 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 ZNF514Q96K75 400 aaPredicted RBP16.28■□□□□ 0.2
TRIM27-201ENST00000377194 DOHHQ9BU89 302 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 BARHL1Q9BZE3 327 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 C11orf54Q9H0W9 315 aaPredicted RBP16.28■□□□□ 0.2
TRIM27-201ENST00000377194 C12orf4Q9NQ89 552 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 WBP1LQ9NX94 342 aa16.28■□□□□ 0.2
TRIM27-201ENST00000377194 TBC1D3BA6NDS4 549 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 EFCAB10A6NFE3 127 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 PRAMEF25A6NGN4 478 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 NFATC1O95644 943 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 OR1E2P47887 323 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 SLC5A12Q1EHB4 618 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 CYP27C1Q4G0S4 372 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 TOR2AQ5JU69 321 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 C10orf62Q5T681 223 aaPredicted RBP16.27■□□□□ 0.2
TRIM27-201ENST00000377194 HIST2H2AA3Q6FI13 130 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 PPCDCQ96CD2 204 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 HDHD5Q9BXW7 423 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 DYRK4Q9NR20 520 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 NDUFAF4Q9P032 175 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 SLC6A14Q9UN76 642 aa16.27■□□□□ 0.2
TRIM27-201ENST00000377194 MUC22E2RYF6 1773 aaPredicted RBP16.27■□□□□ 0.2
TRIM27-201ENST00000377194 TRPM6Q9BX84 2022 aa16.27■□□□□ 0.19
TRIM27-201ENST00000377194 LEUTXA8MZ59 168 aa16.27■□□□□ 0.19
TRIM27-201ENST00000377194 B4DXG7 233 aa16.27■□□□□ 0.19
TRIM27-201ENST00000377194 PPIBP23284 216 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms