RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ST13P50502 369 aaKnown RBP20.52■□□□□ 0.88
SRM-201ENST00000376957 HK2P52789 917 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 ERVK-8P63133 956 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 HEPACAMQ14CZ8 416 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 HLA-DQA1Q5Y7H0 255 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 SLC48A1Q6P1K1 146 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.52■□□□□ 0.88
SRM-201ENST00000376957 DND1Q8IYX4 353 aaKnown RBP20.52■□□□□ 0.88
SRM-201ENST00000376957 BANPQ8N9N5 519 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 SGCZQ96LD1 299 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 RASL10BQ96S79 203 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 TMEM109Q9BVC6 243 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 ACPTQ9BZG2 426 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 EML4Q9HC35 981 aaKnown RBP20.52■□□□□ 0.88
SRM-201ENST00000376957 ERVK-19Q9WJR5 959 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 OSGIN2Q9Y236 505 aa20.52■□□□□ 0.88
SRM-201ENST00000376957 PCDH7O60245 1069 aa20.51■□□□□ 0.87
SRM-201ENST00000376957 ERAL1O75616 437 aaKnown RBP20.51■□□□□ 0.87
SRM-201ENST00000376957 UNC5CO95185 931 aa20.51■□□□□ 0.87
SRM-201ENST00000376957 UROSP10746 265 aa20.51■□□□□ 0.87
SRM-201ENST00000376957 DRD2P14416 443 aa20.51■□□□□ 0.87
SRM-201ENST00000376957 ZNF24P17028 368 aa20.51■□□□□ 0.87
SRM-201ENST00000376957 TCHHL1Q5QJ38 904 aaPredicted RBP20.51■□□□□ 0.87
SRM-201ENST00000376957 IL20RBQ6UXL0 311 aa20.51■□□□□ 0.87
SRM-201ENST00000376957 RTL4Q6ZR62 310 aa20.51■□□□□ 0.87
SRM-201ENST00000376957 SHCBP1LQ9BZQ2 653 aa20.51■□□□□ 0.87
SRM-201ENST00000376957 GIMAP4Q9NUV9 329 aa20.51■□□□□ 0.87
SRM-201ENST00000376957 RGS16O15492 202 aaPredicted RBP20.5■□□□□ 0.87
SRM-201ENST00000376957 PRKNO60260 465 aaPredicted RBP20.5■□□□□ 0.87
SRM-201ENST00000376957 IGKV3-11P04433 115 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 CPMP14384 443 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 NT5EP21589 574 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 KRT71Q3SY84 523 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 C10orf107Q8IVU9 208 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 TAGAPQ8N103 731 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 GOLM1Q8NBJ4 401 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 PSD4Q8NDX1 1056 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 TM4SF18Q96CE8 201 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 KLHL29Q96CT2 875 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 FRMD6Q96NE9 622 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 GAL3ST4Q96RP7 486 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 HES7Q9BYE0 225 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 LIN28AQ9H9Z2 209 aaKnown RBP20.5■□□□□ 0.87
SRM-201ENST00000376957 PFDN4Q9NQP4 134 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 RAB21Q9UL25 225 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 CFL2Q9Y281 166 aa20.5■□□□□ 0.87
SRM-201ENST00000376957 CAPN14A8MX76 684 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 PEX1O43933 1283 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 MYZAPP0CAP1 466 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 SOX3P41225 446 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 TDGF1P3P51864 188 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 PMP22Q01453 160 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 BTKQ06187 659 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 C4orf17Q53FE4 359 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 PIGGQ5H8A4 983 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 ZNF321PQ8N8H1 164 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 OR7G1Q8NGA0 311 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 METTL2AQ96IZ6 378 aaKnown RBP20.49■□□□□ 0.87
SRM-201ENST00000376957 FAM111AQ96PZ2 611 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 KCNA7Q96RP8 456 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 CXorf21Q9HAI6 301 aa20.49■□□□□ 0.87
SRM-201ENST00000376957 C2orf92A0A1B0GVN3 265 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 TMEM200CA6NKL6 621 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 WASHC1A8K0Z3 465 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 NPIPA5E9PKD4 350 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 ACOT7O00154 380 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 UBFD1O14562 309 aaKnown RBP20.48■□□□□ 0.87
SRM-201ENST00000376957 RGS14O43566 566 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 SEMA7AO75326 666 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 ERLIN1O75477 346 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 OR6B1O95007 311 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 P04436 131 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 ANXA4P09525 319 aaPredicted RBP20.48■□□□□ 0.87
SRM-201ENST00000376957 SERPINB3P29508 390 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 TIA1P31483 386 aaKnown RBP eCLIP20.48■□□□□ 0.87
SRM-201ENST00000376957 MEOX1P50221 254 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 NRG3P56975 720 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 HMGCS1Q01581 520 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 PCLAFQ15004 111 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 GALNT18Q6P9A2 607 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 BNC2Q6ZN30 1099 aaPredicted RBP20.48■□□□□ 0.87
SRM-201ENST00000376957 TRIM46Q7Z4K8 759 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 SULF2Q8IWU5 870 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 FAM76AQ8TAV0 307 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 TCP10LQ8TDR4 215 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 TP53INP1Q96A56 240 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 MAGED4Q96JG8 741 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 GPR137Q96N19 417 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 C12orf65Q9H3J6 166 aaKnown RBP20.48■□□□□ 0.87
SRM-201ENST00000376957 SIRT5Q9NXA8 310 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 UTS2RQ9UKP6 389 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 NPIPA1Q9UND3 350 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 DLGAP4Q9Y2H0 992 aa20.48■□□□□ 0.87
SRM-201ENST00000376957 WBP11Q9Y2W2 641 aaKnown RBP20.48■□□□□ 0.87
SRM-201ENST00000376957 SLC28A1O00337 649 aa20.47■□□□□ 0.87
SRM-201ENST00000376957 TFECO14948 347 aaPredicted RBP20.47■□□□□ 0.87
SRM-201ENST00000376957 SPAG7O75391 227 aa20.47■□□□□ 0.87
SRM-201ENST00000376957 RSL1D1O76021 490 aaKnown RBP20.47■□□□□ 0.87
SRM-201ENST00000376957 ATP1B1P05026 303 aa20.47■□□□□ 0.87
SRM-201ENST00000376957 STSP08842 583 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms