RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 IKZF5Q9H5V7 419 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 CXorf36Q9H7Y0 433 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 KAT8Q9H7Z6 458 aaKnown RBP7.31□□□□□ -1.24
SSX9-201ENST00000376909 TPT1P8Q9HAU6 139 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 ZNF304Q9HCX3 659 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 SEMA3GQ9NS98 782 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 OCIAD1Q9NX40 245 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 DHCR7Q9UBM7 475 aaKnown RBP7.31□□□□□ -1.24
SSX9-201ENST00000376909 SUCOQ9UBS9 1254 aaKnown RBP7.31□□□□□ -1.24
SSX9-201ENST00000376909 BCAP29Q9UHQ4 241 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 CORO2BQ9UQ03 480 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 SNX8Q9Y5X2 465 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 MAU2Q9Y6X3 613 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 LAMA1P25391 3075 aa7.31□□□□□ -1.24
SSX9-201ENST00000376909 COL5A1P20908 1838 aaPredicted RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 RNF103-CHMP3A0A140T963 221 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 PROB1E7EW31 1015 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 CLDN4O14493 209 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 POLR1CO15160 346 aaPredicted RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 GSTA4O15217 222 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 HYAL3O43820 417 aaPredicted RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 FGF17O60258 216 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 B4GALT2O60909 372 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 CTNSO60931 367 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 LDB3O75112 727 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 GMNNO75496 209 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 SCRG1O75711 98 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 BCAS2O75934 225 aaPredicted RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 NTRK1P04629 796 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 FHP07954 510 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 CDK4P11802 303 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 FGF5P12034 268 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 CPMP14384 443 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 GPX2P18283 190 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 IL10P22301 178 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 HTR1EP28566 365 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 XCR1P46094 333 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 CCT3P49368 545 aaKnown RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 CDK9P50750 372 aaKnown RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 PDX1P52945 283 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 ACTR3P61158 418 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 MS4A2Q01362 244 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 MC2RQ01718 297 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 ID2Q02363 134 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 FOLH1Q04609 750 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 DUSP2Q05923 314 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 ABHD18Q0P651 414 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 FLOT2Q14254 428 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 TRIP6Q15654 476 aaKnown RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 SYT16Q17RD7 645 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.3□□□□□ -1.24
SSX9-201ENST00000376909 ARHGAP40Q5TG30 622 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 C1orf189Q5VU69 101 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 RHBDD2Q6NTF9 364 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 PWWP2BQ6NUJ5 590 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 ANGPTL8Q6UXH0 198 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 TMEM64Q6YI46 380 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 GLRX5Q86SX6 157 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 CALHM3Q86XJ0 350 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 C10orf67Q8IYJ2 551 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 SHISA5Q8N114 240 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 CLEC4FQ8N1N0 589 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 OR2T12Q8NG77 320 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 OR9A2Q8NGT5 310 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 OR5AK3PQ8NH89 298 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 SUN3Q8TAQ9 357 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 RNF217Q8TC41 542 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 PNPT1Q8TCS8 783 aaKnown RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 JADE3Q92613 823 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 ANKRD9Q96BM1 317 aaPredicted RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 MOAP1Q96BY2 351 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 CLIP3Q96DZ5 547 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 ZNF583Q96ND8 569 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 CMKLR1Q99788 373 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 RBCK1Q9BYM8 510 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 TRIM4Q9C037 500 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 PCDHAC1Q9H158 963 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 PIF1Q9H611 641 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 APMAPQ9HDC9 416 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 FBXO8Q9NRD0 319 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 PRTFDC1Q9NRG1 225 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 SIRT3Q9NTG7 399 aaPredicted RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 TRPC4Q9UBN4 977 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 ACSL6Q9UKU0 697 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 TMEM184BQ9Y519 407 aaPredicted RBP7.3□□□□□ -1.24
SSX9-201ENST00000376909 GMEB1Q9Y692 573 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 PI4KAP42356 2102 aa7.3□□□□□ -1.24
SSX9-201ENST00000376909 HEATR5BQ9P2D3 2071 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.29□□□□□ -1.24
SSX9-201ENST00000376909 A0A1W2PS29 197 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 ELOVL7A1L3X0 281 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 FAM220BPB1ANY3 271 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 B4E171 279 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 ACOT8O14734 319 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 EMC8O43402 210 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 MGRN1O60291 552 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 OR10H2O60403 315 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 ENTPD5O75356 428 aa7.29□□□□□ -1.24
SSX9-201ENST00000376909 CDC123O75794 336 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms