RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 MLLT11Q13015 90 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 NCF4Q15080 339 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 UAP1L1Q3KQV9 507 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 CRB2Q5IJ48 1285 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ATAT1Q5SQI0 421 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 LCN1P1Q5VSP4 162 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 DEF8Q6ZN54 512 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SCAMP4Q969E2 229 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SCRN2Q96FV2 425 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SLC6A18Q96N87 628 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 WRAP53Q9BUR4 548 aaKnown RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 GON7Q9BXV9 100 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 BRF2Q9HAW0 419 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 HCFC1R1Q9NWW0 138 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 A0A0X1KG70 313 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 FFAR1O14842 300 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 POLR1CO15160 346 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 TLX2O43763 284 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF780AO75290 641 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SLC16A8O95907 504 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ADAP00813 363 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 TGFB1P01137 390 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ITGB7P26010 798 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 APEX1P27695 318 aaKnown RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 PREPP48147 710 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF33BQ06732 778 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 PCDH1Q08174 1060 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 HEPACAMQ14CZ8 416 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SEC23BQ15437 767 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 GPR19Q15760 415 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 BTBD16Q32M84 506 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SYTL3Q4VX76 610 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 TMEM184AQ6ZMB5 413 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ABI3BPQ7Z7G0 1075 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 CMTM8Q8IZV2 173 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 GALNT6Q8NCL4 622 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 PROKR2Q8NFJ6 384 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 NLGN4YQ8NFZ3 816 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 OR2AP1Q8NGE2 309 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 OR5H6Q8NGV6 325 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ZFAND1Q8TCF1 268 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 BTN2A2Q8WVV5 523 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ASZ1Q8WWH4 475 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 GFM1Q96RP9 751 aaKnown RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 POLR2J3Q9H1A7 115 aaKnown RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 TMEM245Q9H330 911 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 TMEM38AQ9H6F2 299 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 CFAP97Q9P2B7 532 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 STOX2Q9P2F5 926 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 PLEKHB1Q9UF11 243 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 CLEC4EQ9ULY5 219 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 NDRG2Q9UN36 371 aaKnown RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ZSCAN5BA6NJL1 495 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 C12orf71A8MTZ7 269 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 C5orf58C9J3I9 102 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 SMLR1H3BR10 107 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 AKR7A2O43488 359 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 IL1AP01583 271 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 MSL3P1P0C860 447 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 MAP2K3P46734 347 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 MAN2A2P49641 1150 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 SNRPGP62308 76 aaKnown RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 EEF1A2Q05639 463 aaKnown RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 NFE2L1Q14494 772 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 PUM1Q14671 1186 aaKnown RBP eCLIP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 TEAD2Q15562 447 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 DCST1Q5T197 706 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 MPP7Q5T2T1 576 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF770Q6IQ21 691 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 COMMD6Q7Z4G1 85 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 LMNTD1Q8N9Z9 388 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 DEDD2Q8WXF8 326 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 TIFAQ96CG3 184 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 CLIP3Q96DZ5 547 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 OR51B5Q9H339 312 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 ZDHHC6Q9H6R6 413 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 ANKRA2Q9H9E1 313 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 CERS4Q9HA82 394 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 TEKT2Q9UIF3 430 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 ALG5Q9Y673 324 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 PRRC2BQ5JSZ5 2229 aaKnown RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 IGLV3-16A0A075B6K0 115 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 LEFTY2O00292 366 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 PDE9AO76083 593 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 ARAFP10398 606 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 SLC2A2P11168 524 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 SLC9A3P48764 834 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 TAS2R50P59544 299 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 DSTNP60981 165 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 TARDBPQ13148 414 aaKnown RBP eCLIP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 ELOAQ14241 798 aaKnown RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 MPEG1Q2M385 716 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 SIGIRRQ6IA17 410 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 TNFAIP8L2Q6P589 184 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 DPY19L3Q6ZPD9 716 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 LILRA3Q8N6C8 439 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 NEIL2Q969S2 332 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 MED30Q96HR3 178 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms