RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 KCNK12Q9HB15 430 aa17.73■□□□□ 0.43
USP49-202ENST00000373010 NECTIN3Q9NQS3 549 aa17.73■□□□□ 0.43
USP49-202ENST00000373010 ZCCHC3Q9NUD5 404 aaKnown RBP17.73■□□□□ 0.43
USP49-202ENST00000373010 CA5BQ9Y2D0 317 aa17.73■□□□□ 0.43
USP49-202ENST00000373010 ATG4BQ9Y4P1 393 aa17.73■□□□□ 0.43
USP49-202ENST00000373010 CEP290O15078 2479 aa17.73■□□□□ 0.43
USP49-202ENST00000373010 A0A1W2PR48 441 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 A0A1W2PS29 197 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 POM121BA6NF01 834 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 EML2O95834 649 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 STSP08842 583 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 POU1F1P28069 291 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 CTSKP43235 329 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 PRKAG1P54619 331 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 DUSP2Q05923 314 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 SLC9A5Q14940 896 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 TMEM35AQ53FP2 167 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 MLIPQ5VWP3 458 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 COMTD1Q86VU5 262 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 DEPDC4Q8N2C3 294 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 MYDGFQ969H8 173 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 BBS4Q96RK4 519 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 PRDM7Q9NQW5 492 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 FKBP14Q9NWM8 211 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 SEC14L3Q9UDX4 400 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 FTSJ1Q9UET6 329 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 FBXW2Q9UKT8 454 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 PDE9AO76083 593 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 CDK1P06493 297 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 CHMP24386 653 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 LIPAP38571 399 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 KCNJ5P48544 419 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 MLC1Q15049 377 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 ABHD17CQ6PCB6 329 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 Q6ZNX1 250 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 ACOT4Q8N9L9 421 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 DENND6BQ8NEG7 585 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 TRUB1Q8WWH5 349 aaKnown RBP17.72■□□□□ 0.43
USP49-202ENST00000373010 FAIM2Q9BWQ8 316 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 ASB4Q9Y574 426 aa17.72■□□□□ 0.43
USP49-202ENST00000373010 C8orf89P0DMQ9 161 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 HIST1H1TP22492 207 aaPredicted RBP17.71■□□□□ 0.43
USP49-202ENST00000373010 CERS1P27544 350 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 CRISP1P54107 249 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 RAB8AP61006 207 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 NR1D2Q14995 579 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 C18orf63Q68DL7 685 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 IL17RCQ8NAC3 791 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 SH3YL1Q96HL8 342 aaPredicted RBP17.71■□□□□ 0.43
USP49-202ENST00000373010 ZNF607Q96SK3 696 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 C1QTNF7Q9BXJ2 289 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 CD93Q9NPY3 652 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 P2RX2Q9UBL9 471 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 A0A1W2PQF6 199 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 M0R082 166 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 NADKO95544 446 aaPredicted RBP17.71■□□□□ 0.43
USP49-202ENST00000373010 KLF8O95600 359 aaPredicted RBP17.71■□□□□ 0.43
USP49-202ENST00000373010 IGFBP1P08833 259 aaPredicted RBP17.71■□□□□ 0.43
USP49-202ENST00000373010 NR2F1P10589 423 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 ATP5A1P25705 553 aaKnown RBP17.71■□□□□ 0.43
USP49-202ENST00000373010 NTSP30990 170 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 TMEM184AQ6ZMB5 413 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 FAM131CQ96AQ9 280 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 ZNF354BQ96LW1 612 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 MAPKAP1Q9BPZ7 522 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 ITPAQ9BY32 194 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 MS4A12Q9NXJ0 267 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 EHD3Q9NZN3 535 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 TBC1D29Q9UFV1 150 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 APOBEC3BQ9UH17 382 aaKnown RBP17.71■□□□□ 0.43
USP49-202ENST00000373010 TMCC3Q9ULS5 477 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 PMF1-BGLAPU3KQ54 211 aa17.71■□□□□ 0.43
USP49-202ENST00000373010 PRSS38A1L453 326 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 ISM1B1AKI9 464 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 HOXB2P14652 356 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 ELAVL4P26378 380 aaKnown RBP17.7■□□□□ 0.42
USP49-202ENST00000373010 AK4P27144 223 aaPredicted RBP17.7■□□□□ 0.42
USP49-202ENST00000373010 CNR2P34972 360 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 IDUAP35475 653 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 FRMPD2BQ6IN97 320 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 RD3Q7Z3Z2 195 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 BTLAQ7Z6A9 289 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 CCDC116Q8IYX3 515 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 OR4E2Q8NGC2 313 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 CNRIP1Q96F85 164 aaPredicted RBP17.7■□□□□ 0.42
USP49-202ENST00000373010 GABRG3Q99928 467 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 ARMC7Q9H6L4 198 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 SEMA3GQ9NS98 782 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 RHBDL2Q9NX52 303 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 SCN3AQ9NY46 2000 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 TMEM247A6NEH6 219 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 ARRDC5A6NEK1 342 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 ZAR1LA6NP61 321 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 H0Y8X5 98 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 M0R3H8 397 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 AIFM1O95831 613 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 EGFP01133 1207 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 CDC42P60953 191 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 ABATP80404 500 aa17.7■□□□□ 0.42
USP49-202ENST00000373010 TBCEQ15813 527 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms