RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 LMX1AQ8TE12 382 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 SPACA7Q96KW9 195 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 BARD1Q99728 777 aaKnown RBP23.58■■□□□ 1.37
CTSA-203ENST00000372459 AMBRA1Q9C0C7 1298 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 OR51I1Q9H343 314 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 SERHL2Q9H4I8 314 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 THSD1Q9NS62 852 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 P2RX2Q9UBL9 471 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 RSL24D1Q9UHA3 163 aaKnown RBP23.58■■□□□ 1.37
CTSA-203ENST00000372459 POMT2Q9UKY4 750 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 ZNF451Q9Y4E5 1061 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 PCDHGB3Q9Y5G1 929 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 ADAMDEC1O15204 470 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 EIF2S1P05198 315 aaKnown RBP23.58■■□□□ 1.36
CTSA-203ENST00000372459 MATN1P21941 496 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 RRM2P31350 389 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 SNRPNP63162 240 aaKnown RBP23.58■■□□□ 1.36
CTSA-203ENST00000372459 DUSP2Q05923 314 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 LAPTM4AQ15012 233 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 SMYD1Q8NB12 490 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 CLDN23Q96B33 292 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 MAGED4Q96JG8 741 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 YTHDF1Q9BYJ9 559 aaKnown RBP23.58■■□□□ 1.36
CTSA-203ENST00000372459 TIMMDC1Q9NPL8 285 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 MS4A12Q9NXJ0 267 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 KCMF1Q9P0J7 381 aa23.58■■□□□ 1.36
CTSA-203ENST00000372459 ALOX12P18054 663 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 TNFRSF1BP20333 461 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 KHKP50053 298 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 MAZP56270 477 aaKnown RBP23.57■■□□□ 1.36
CTSA-203ENST00000372459 PPP1CAP62136 330 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 ZP2Q05996 745 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 RPS26P11Q5JNZ5 115 aaPredicted RBP23.57■■□□□ 1.36
CTSA-203ENST00000372459 TSEN54Q7Z6J9 526 aaKnown RBP23.57■■□□□ 1.36
CTSA-203ENST00000372459 C8orf59Q8N0T1 100 aaPredicted RBP23.57■■□□□ 1.36
CTSA-203ENST00000372459 OR56A1Q8NGH5 318 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 KLHL6Q8WZ60 621 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 HSPA12BQ96MM6 686 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 ZNF681Q96N22 645 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 GUCD1Q96NT3 240 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 SEMA6CQ9H3T2 930 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 DAPP1Q9UN19 280 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 DNAH14Q0VDD8 3507 aa23.57■■□□□ 1.36
CTSA-203ENST00000372459 TRIM64A6NGJ6 449 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 H3BSA7 217 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 FHP07954 510 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 OR12D1P0DN82 309 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 ALPPL2P10696 532 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 TLX1P31314 330 aaPredicted RBP23.56■■□□□ 1.36
CTSA-203ENST00000372459 SLC5A2P31639 672 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 OR1E2P47887 323 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 PRKAG1P54619 331 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 LIM2P55344 173 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 PRR5P85299 388 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.56■■□□□ 1.36
CTSA-203ENST00000372459 KDM4DQ6B0I6 523 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 KLHL35Q6PF15 583 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 ZNF438Q7Z4V0 828 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 SAMD14Q8IZD0 417 aaPredicted RBP23.56■■□□□ 1.36
CTSA-203ENST00000372459 C10orf90Q96M02 699 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 ZNF300Q96RE9 604 aaPredicted RBP23.56■■□□□ 1.36
CTSA-203ENST00000372459 PRDM9Q9NQV7 894 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 TRPC4Q9UBN4 977 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 A0A087WXM4 84 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 PIGAP37287 484 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 FASLGP48023 281 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 DAPP51397 102 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 TPD52P55327 224 aaPredicted RBP23.56■■□□□ 1.36
CTSA-203ENST00000372459 RUNX2Q13950 521 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 GPR19Q15760 415 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 TMEM107Q6UX40 140 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 SLC36A4Q6YBV0 504 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 THAP5Q7Z6K1 395 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 CYP4Z1Q86W10 505 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 ARL14Q8N4G2 192 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 ING2Q9H160 280 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 KIF17Q9P2E2 1029 aa23.56■■□□□ 1.36
CTSA-203ENST00000372459 SCN3AQ9NY46 2000 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 LOC100130705A0A1B0GUX0 176 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 A0A1B0GVG6 124 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 SLC28A2O43868 658 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 TRMUO75648 421 aaKnown RBP23.55■■□□□ 1.36
CTSA-203ENST00000372459 UBXN7O94888 489 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 PPP2R1BP30154 601 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 CSNK1A1LQ8N752 337 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 PIK3C3Q8NEB9 887 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 OR5D16Q8NGK9 328 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 ADAMTS16Q8TE57 1224 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 XAGE5Q8WWM1 108 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 ZNF607Q96SK3 696 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 CCDC3Q9BQI4 270 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 C3orf14Q9HBI5 128 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 LYRM4Q9HD34 91 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 SH3GLB1Q9Y371 365 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 TESMINQ9Y4I5 508 aa23.55■■□□□ 1.36
CTSA-203ENST00000372459 A0A1W2PS29 197 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 EMC8O43402 210 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 ITGAMP11215 1152 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 PTGER1P34995 402 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 MAPK11Q15759 364 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms