RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZNF286AQ9HBT8 521 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 TAS2R16Q9NYV7 291 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 ROBO2Q9HCK4 1378 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 RHOQP17081 205 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 YBEYP58557 167 aaPredicted RBP14.66□□□□□ -0.06
COL5A1-201ENST00000371817 NFIXQ14938 502 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 IQCF1Q8N6M8 205 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 OR8J1Q8NGP2 316 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 C12orf57Q99622 126 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 NT5DC2Q9H857 520 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 CARS2Q9HA77 564 aaKnown RBP14.66□□□□□ -0.06
COL5A1-201ENST00000371817 DOCK9Q9BZ29 2069 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 ACOT7O00154 380 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 TXNDC12O95881 172 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 PLGP00747 810 aaPredicted RBP14.66□□□□□ -0.06
COL5A1-201ENST00000371817 C9orf57Q5W0N0 161 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 P4HA3Q7Z4N8 544 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 KIAA0319LQ8IZA0 1049 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 SMPDL3AQ92484 453 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 DGAT2Q96PD7 388 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 OR2M2Q96R28 347 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 FAM159BA6NKW6 160 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 OR10K2Q6IF99 312 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 PLEKHH3Q7Z736 793 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF454Q8N9F8 522 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 OR52H1Q8NGJ2 320 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 RHCGQ9UBD6 479 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 NWD1Q149M9 1564 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 HTR1EP28566 365 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 DNAJB13P59910 316 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 MRPS10P82664 201 aaKnown RBP14.66□□□□□ -0.06
COL5A1-201ENST00000371817 DHCR24Q15392 516 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 INAVAQ3KP66 663 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 PAPD5Q8NDF8 572 aaKnown RBP14.66□□□□□ -0.06
COL5A1-201ENST00000371817 LRR1Q96L50 414 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 DPYSL5Q9BPU6 564 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 IL21RQ9HBE5 538 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 LRP5LA4QPB2 252 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 ADH1AP07327 375 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 PROZP22891 400 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 RFC2P35250 354 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 MTNR1AP48039 350 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 TGM4P49221 684 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 TOP6BLQ8N6T0 577 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 SLC35F5Q8WV83 523 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 RSC1A1Q92681 617 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 RAB39BQ96DA2 213 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 NIPSNAP3BQ9BS92 247 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 GPR83Q9NYM4 423 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 REV1Q9UBZ9 1251 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 PCDHGA7Q9Y5G6 932 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 PRSS51A0A1B0GVH4 220 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 RNASEH2AO75792 299 aaKnown RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 PRSS3P35030 304 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF157P51786 506 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 OR6N2Q8NGY6 317 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 C16orf78Q8WTQ4 265 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 SLC29A3Q9BZD2 475 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 RXFP3Q9NSD7 469 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 A0A1W2PPL8 197 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 SLC22A31A6NKX4 558 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF84P51523 738 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ALKBH4Q9NXW9 302 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 RNF181Q9P0P0 153 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 YY2O15391 372 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 CLRN1P58418 232 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 CSNK2A1P68400 391 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 PAQR3Q6TCH7 311 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 BAGE3Q86Y29 109 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 BAGE2Q86Y30 109 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 MS4A15Q8N5U1 240 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 CSNK2A3Q8NEV1 391 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 FAM46BQ96A09 425 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 WRAP53Q9BUR4 548 aaKnown RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 FAM124BQ9H5Z6 455 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 FAM212BQ9NTI7 297 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 A0A0G2JN53 185 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 GGT3PA6NGU5 568 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 H0YGN5 161 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 CAPNS1P04632 268 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ALPPL2P10696 532 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 GGT2P36268 569 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 MMP12P39900 470 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF169Q14929 603 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 CHRNA6Q15825 494 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ANKRD60Q9BZ19 345 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 PATZ1Q9HBE1 687 aaKnown RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 FNIP2Q9P278 1114 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF736B4DX44 427 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ANGPTL7O43827 346 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 MAS1P04201 325 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ADORA2AP29274 412 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF41P51814 821 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 OAZ1P54368 228 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 SLBPQ14493 270 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 GAREM2Q75VX8 874 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 SMAP2Q8WU79 429 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 HOXB13Q92826 284 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ESAMQ96AP7 390 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 RBMXL1Q96E39 390 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms