RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 MLF2Q15773 248 aaPredicted RBP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 NDUFAF5Q5TEU4 345 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 FAM46CQ5VWP2 391 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 IQCF1Q8N6M8 205 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 SMARCD2Q92925 531 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 QRFPRQ96P65 431 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 PSD2Q9BQI7 771 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 HDAC8Q9BY41 377 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 AICDAQ9GZX7 198 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 POLR2J3Q9H1A7 115 aaKnown RBP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 GLIPR2Q9H4G4 154 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 ENOPH1Q9UHY7 261 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 MOSPD1Q9UJG1 213 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 ARHGAP33O14559 1287 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 EIF2B2P49770 351 aaKnown RBP17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 CARTPTQ16568 116 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 OR4C11Q6IEV9 310 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 KBTBD8Q8NFY9 601 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 ZNF354BQ96LW1 612 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 CDCA4Q9BXL8 241 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 ZCCHC3Q9NUD5 404 aaKnown RBP17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 UPK1BO75841 260 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 ADAP00813 363 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 IMPDH2P12268 514 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 OLR1P78380 273 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 TEKQ02763 1124 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 ZNF793Q6ZN11 406 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 LYSMD2Q8IV50 215 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 ZNF607Q96SK3 696 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 SCHIP1Q9P0W5 487 aaPredicted RBP17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 SH3D21A4FU49 640 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 S100A5P33763 92 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 XKP51811 444 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 TCEA2Q15560 299 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 GPR19Q15760 415 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 STEAP3Q658P3 488 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 GET4Q7L5D6 327 aaPredicted RBP17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 MEX3DQ86XN8 651 aaKnown RBP17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 TCEANCQ8N8B7 351 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 TP53I13Q8NBR0 393 aaPredicted RBP17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 CERS4Q9HA82 394 aa17.13■□□□□ 0.33
UBQLN4-201ENST00000368309 DSPPQ9NZW4 1301 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 OR52A4PA6NMU1 304 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 ZNF367Q7RTV3 350 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 SLC34A3Q8N130 599 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 POC5Q8NA72 575 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 HPS1Q92902 700 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 KCNS3Q9BQ31 491 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 EXOSC4Q9NPD3 245 aaKnown RBP17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 KIAA1549LQ6ZVL6 1849 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 KMOO15229 486 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 MPZL2O60487 215 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 NME6O75414 186 aaPredicted RBP17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 PDE9AO76083 593 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 C8orf89P0DMQ9 161 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 SOX3P41225 446 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 NCBP2P52298 156 aaKnown RBP eCLIP17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 ILKQ13418 452 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 SSX1Q16384 188 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 TANGO2Q6ICL3 276 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 PGBD2Q6P3X8 592 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 RBM12BQ8IXT5 1001 aaKnown RBP17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 PARP16Q8N5Y8 322 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 PCBD2Q9H0N5 130 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 ANKHQ9HCJ1 492 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 KLHL20Q9Y2M5 609 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 ARRDC5A6NEK1 342 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 PGRMC2O15173 223 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 HSD17B2P37059 387 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 FRKP42685 505 aaPredicted RBP17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 UGT2B15P54855 530 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 ATCAYQ86WG3 371 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 AMDHD1Q96NU7 426 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 PRR14Q9BWN1 585 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 WDR26Q9H7D7 661 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 INIPQ9NRY2 104 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 TVP23BQ9NYZ1 205 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 CNOT2Q9NZN8 540 aaKnown RBP17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 KLK4Q9Y5K2 254 aa17.12■□□□□ 0.33
UBQLN4-201ENST00000368309 A0A1W2PP55 124 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 A0A1W2PS29 197 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 LRIT2A6NDA9 550 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 ALOX5P09917 674 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 PRDX1Q06830 199 aaKnown RBP17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 KRT33BQ14525 404 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 CASP12Q6UXS9 341 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 OR2A1Q8NGT9 310 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 OR8K5Q8NH50 307 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 C9orf43Q8TAL5 461 aaPredicted RBP17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 RAB7BQ96AH8 199 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 SLC35G5Q96KT7 338 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 QRSL1Q9H0R6 528 aaKnown RBP17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 DDX31Q9H8H2 851 aaKnown RBP17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 MGAT4BQ9UQ53 548 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 WBP11Q9Y2W2 641 aaKnown RBP17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 GRXCR1A8MXD5 290 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 CCRL2O00421 344 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 GPX5O75715 221 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 ALOX12P18054 663 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms