RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ITGA10O75578 1167 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 LYPLA1O75608 230 aaPredicted RBP20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 NEURL1O76050 574 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 CLPSP04118 112 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 CT62P0C5K7 136 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 LINC00032P0C843 101 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 CPMP14384 443 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 H2AFXP16104 143 aaPredicted RBP20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 TRHRP34981 398 aaPredicted RBP20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 WDR4P57081 412 aaKnown RBP20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 MAGOHP61326 146 aaKnown RBP20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 ERVK-8P63133 956 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 RNF4P78317 190 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 SPINK14Q6IE38 97 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 FAM180BQ6P0A1 224 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 FAM76AQ8TAV0 307 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 AGR3Q8TD06 166 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 RIT1Q92963 219 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 ZNF681Q96N22 645 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 C20orf27Q9GZN8 174 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 STMN4Q9H169 189 aaPredicted RBP20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 ERVK-19Q9WJR5 959 aa20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 SVILO95425 2214 aa20.83■□□□□ 0.93
ECHDC1-203ENST00000368291 TMEM120BA0PK00 339 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 CDK2AP1O14519 115 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 PRAMEF2O60811 474 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 WISP1O95388 367 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 SERPINE1P05121 402 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 DRD2P14416 443 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 PORP16435 677 aaPredicted RBP20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 SOX18P35713 384 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 ALDH9A1P49189 494 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 HK2P52789 917 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 ZNF763Q0D2J5 394 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 ZNF267Q14586 743 aaPredicted RBP20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 OR1C1Q15619 314 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 NOXRED1Q6NXP6 359 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 C9orf40Q8IXQ3 194 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 CNRIP1Q96F85 164 aaPredicted RBP20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 METTL2AQ96IZ6 378 aaKnown RBP20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 ART5Q96L15 291 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 FCRL1Q96LA6 429 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 CNPPD1Q9BV87 410 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 HES7Q9BYE0 225 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 LRTM1Q9HBL6 345 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 C1orf109Q9NX04 203 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 MYOTQ9UBF9 498 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 COPS7AQ9UBW8 275 aa20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 COPG1Q9Y678 874 aaKnown RBP20.83■□□□□ 0.92
ECHDC1-203ENST00000368291 ZGRF1Q86YA3 2104 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 FCHO1O14526 889 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 PIP5K1BO14986 540 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 LSM1O15116 133 aaKnown RBP20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 RGS14O43566 566 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 ZNF354AO60765 605 aaPredicted RBP20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 SEC22BO75396 215 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 ERAL1O75616 437 aaKnown RBP20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 CHEK2O96017 543 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 FEN1P39748 380 aaKnown RBP20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 GSTM5P46439 218 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 ZNF766Q5HY98 468 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 ANKRD42Q8N9B4 389 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 PPP1R14CQ8TAE6 165 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 ARL8AQ96BM9 186 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 KLHL29Q96CT2 875 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 SCMH1Q96GD3 660 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 TAAR6Q96RI8 345 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 LRFN1Q9P244 771 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 EXO1Q9UQ84 846 aaKnown RBP20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 YARS2Q9Y2Z4 477 aaKnown RBP20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 PCDHGB6Q9Y5F9 930 aa20.82■□□□□ 0.92
ECHDC1-203ENST00000368291 GOLGA6L10A6NI86 522 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 WWP2O00308 870 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 DYRK3O43781 588 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 OR2J2O76002 312 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 ATP1B1P05026 303 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 NEFHP12036 1026 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 S1PR1P21453 382 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 BGNP21810 368 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 SSTR4P31391 388 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 PTGER1P34995 402 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 HLCSP50747 726 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 SLC18A1P54219 525 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 SLC37A1P57057 533 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 RELNP78509 3460 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 OC90Q02509 493 aaPredicted RBP20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 MGAT2Q10469 447 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 FUT7Q11130 342 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 ESPL1Q14674 2120 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 HEPACAMQ14CZ8 416 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 PRSS53Q2L4Q9 553 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 PRICKLE4Q2TBC4 344 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 RFTN2Q52LD8 501 aaPredicted RBP20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 XKR7Q5GH72 579 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 FAM71E1Q6IPT2 247 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 HOMEZQ8IX15 550 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 EXPH5Q8NEV8 1989 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 GRHL3Q8TE85 626 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 C3orf30Q96M34 536 aa20.81■□□□□ 0.92
ECHDC1-203ENST00000368291 RASL10BQ96S79 203 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms