RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CALML3P27482 149 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 GDF1P27539 372 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 CXCL6P80162 114 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 GIT2Q14161 759 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 HEPACAMQ14CZ8 416 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 PPP1R3AQ16821 1122 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 OLFML2AQ68BL7 652 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 PHYHIPLQ96FC7 376 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 PDFQ9HBH1 243 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 MLXQ9UH92 298 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 E7ENQ6 273 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 STBD1O95210 358 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 HSP90AA1P07900 732 aaKnown RBP3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 TKTL1P51854 596 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 MEF2DQ14814 521 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 MEP1BQ16820 701 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 TTC31Q49AM3 519 aaPredicted RBP3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 RSBN1Q5VWQ0 802 aaPredicted RBP3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 C17orf64Q86WR6 236 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 TMEM126BQ8IUX1 230 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 NUP93Q8N1F7 819 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 BEST4Q8NFU0 473 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 OR4L1Q8NH43 312 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 UBTD2Q8WUN7 234 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 TEKT1Q969V4 418 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 EPSTI1Q96J88 318 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 LINC00167Q96N53 147 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 SIGLEC12Q96PQ1 595 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 S1PR3Q99500 378 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 MAPKAP1Q9BPZ7 522 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 GRPEL1Q9HAV7 217 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 AMBNQ9NP70 447 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 DNAJC17Q9NVM6 304 aaKnown RBP3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 ANAPC11Q9NYG5 84 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 MIS18AQ9NYP9 233 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 SEC14L4Q9UDX3 406 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 PRODH2Q9UF12 536 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 PRO0461Q9UI25 63 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 EXOC7Q9UPT5 735 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 ERVK-19Q9WJR5 959 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 ITM2BQ9Y287 266 aa3.2□□□□□ -1.9
RNU4-28P-201ENST00000364739 KIF7Q2M1P5 1343 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 CHD4Q14839 1912 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 RAI1Q7Z5J4 1906 aaPredicted RBP3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 SLC35E2P0CK97 266 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 PGAM2P15259 253 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 TRIM23P36406 574 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 MEOX2P50222 304 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 TNFSF10P50591 281 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 NFE2L1Q14494 772 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 RPS6KA1Q15418 735 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 ACER2Q5QJU3 275 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 Q6ZVH6 145 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 PRSS48Q7RTY5 328 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 HAS2Q92819 552 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 PIWIL1Q96J94 861 aaKnown RBP3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 GUCD1Q96NT3 240 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 ST6GALNAC5Q9BVH7 336 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 ZNF350Q9GZX5 532 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 ZDHHC6Q9H6R6 413 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 CLIP2Q9UDT6 1046 aa3.19□□□□□ -1.9
RNU4-28P-201ENST00000364739 TRABD2BA6NFA1 517 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 GMNNO75496 209 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 TPBGLP0DKB5 382 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 MAGEA9P43362 315 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 TNFRSF4P43489 277 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 ARHGDIAP52565 204 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 SLC25A1P53007 311 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 MFAP2P55001 183 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 YWHAHQ04917 246 aaPredicted RBP3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 SLC10A1Q14973 349 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 C9orf129Q5T035 196 aaKnown RBP3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 PRR22Q8IZ63 422 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 SYCP3Q8IZU3 236 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 CLYBLQ8N0X4 340 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 ZNF525Q8N782 197 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 GOLGA5Q8TBA6 731 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 FBXO25Q8TCJ0 367 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 MRPL53Q96EL3 112 aaKnown RBP3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 CYYR1Q96J86 154 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 Q9HAA7 133 aa3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 MRTO4Q9UKD2 239 aaKnown RBP3.18□□□□□ -1.9
RNU4-28P-201ENST00000364739 TMEM129A0AVI4 362 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 EFCAB7A8K855 629 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 MEI4A8MW99 385 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 PSMD3O43242 534 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 TXNDC12O95881 172 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 GAS8O95995 478 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 OAS1P00973 400 aaKnown RBP3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 PDGFBP01127 241 aaPredicted RBP3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 KRT6AP02538 564 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 KRT6BP04259 564 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 SBK2P0C263 348 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 GLULP15104 373 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 CD1EP15812 388 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 KRT6CP48668 564 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 FNTAP49354 379 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 KCNK10P57789 538 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 STEAP1BQ6NZ63 245 aa3.17□□□□□ -1.9
RNU4-28P-201ENST00000364739 APOOLQ6UXV4 268 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms