RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 CDC40O60508 579 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ULK1O75385 1050 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SKAP2O75563 359 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CRCPO75575 148 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 LYPLA1O75608 230 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZFAND5O76080 213 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 PDE9AO76083 593 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 UNC5CO95185 931 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 NADKO95544 446 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ESRRBO95718 433 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 GPR75O95800 540 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CLDN1O95832 211 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 LDLRP01130 860 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 KRT6AP02538 564 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 KRT6BP04259 564 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 IGKV3-11P04433 115 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SP1P08047 785 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 GSTA1P08263 222 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CELA3AP09093 270 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 NUDT17P0C025 328 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CCL3P10147 92 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CPMP14384 443 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 COX7A2P14406 83 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CPA3P15088 417 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CD46P15529 392 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 PCSK2P16519 638 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 EFNA1P20827 205 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 NT5EP21589 574 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 NME2P22392 152 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 TACR1P25103 407 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 PIK3R1P27986 724 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ALDH3A1P30838 453 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 TLX1P31314 330 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 TIA1P31483 386 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 HPDP32754 393 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 PIGAP37287 484 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 BUD31P41223 144 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CCT5P48643 541 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 KRT6CP48668 564 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 DNASE1L1P49184 302 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CYB561P49447 251 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 HLCSP50747 726 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SSR4P51571 173 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 XKP51811 444 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 MAPK12P53778 367 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SLC37A1P57057 533 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 AP2B1P63010 937 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 RPL38P63173 70 aaKnown RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 PLIN5Q00G26 463 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ALDH6A1Q02252 535 aaKnown RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZNF844Q08AG5 666 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ACSM2AQ08AH3 577 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CSTF3Q12996 717 aaKnown RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 LCP2Q13094 533 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SERTAD2Q14140 314 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ELOAQ14241 798 aaKnown RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 RCN2Q14257 317 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 TERF2Q15554 542 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 C3AR1Q16581 482 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CCDC153Q494R4 210 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZNF385BQ569K4 471 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CFAP157Q5JU67 520 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SPDYAQ5MJ70 313 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CEP85LQ5SZL2 805 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 FHL5Q5TD97 284 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 LIPMQ5VYY2 423 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ACSM2BQ68CK6 577 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 BICRALQ6AI39 1079 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZNF324BQ6AW86 544 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR52E8Q6IFG1 317 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SLC25A25Q6KCM7 469 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ANKRD26P1Q6NSI1 321 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 RPUSD3Q6P087 351 aaKnown RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 METTL2BQ6P1Q9 378 aaKnown RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 WDR93Q6P2C0 686 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 EMBQ6PCB8 327 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 LYPD8Q6UX82 237 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 GFRALQ6UXV0 394 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 HSDL2Q6YN16 418 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 C3P1Q6ZMU1 363 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 RNF111Q6ZNA4 994 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 FGD2Q7Z6J4 655 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SLC22A9Q8IVM8 553 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SIAH3Q8IW03 269 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 SULF2Q8IWU5 870 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 GALNT12Q8IXK2 581 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ST13P4Q8IZP2 240 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 LGI4Q8N135 537 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 TMEM132CQ8N3T6 1108 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 RIBC1Q8N443 379 aaPredicted RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 FAM26EQ8N5C1 309 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 TMEM156Q8N614 296 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 BANPQ8N9N5 519 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 EIF1ADQ8N9N8 165 aaKnown RBP3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 ST6GALNAC3Q8NDV1 305 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 PSD4Q8NDX1 1056 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR52N2Q8NGI0 321 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR5M3Q8NGP4 307 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR2T11Q8NH01 316 aa3.22□□□□□ -1.89
RNU4-35P-201ENST00000362588 CLHC1Q8NHS4 586 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms