RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZNF681Q96N22 645 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 DPH2Q9BQC3 489 aaPredicted RBP19.38■□□□□ 0.69
SHISA4-201ENST00000362011 LRMDAQ9H2I8 198 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 SLAMF7Q9NQ25 335 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 ZNF282Q9UDV7 671 aaPredicted RBP19.38■□□□□ 0.69
SHISA4-201ENST00000362011 VPS4AQ9UN37 437 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 MMACHCQ9Y4U1 282 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 PCDHGA3Q9Y5H0 932 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 FXYD1O00168 92 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 MEN1O00255 615 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 KALRNO60229 2985 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 FGF17O60258 216 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 CTNSO60931 367 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 BMP10O95393 424 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 PRB1P04280 392 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 MPIP34949 423 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 FEN1P39748 380 aaKnown RBP19.37■□□□□ 0.69
SHISA4-201ENST00000362011 CDKN2CP42773 168 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 XKP51811 444 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 NCBP2P52298 156 aaKnown RBP eCLIP19.37■□□□□ 0.69
SHISA4-201ENST00000362011 HSD17B7P56937 341 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 SLC13A2Q13183 592 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 DLEU7Q6UYE1 221 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 ZC3H7AQ8IWR0 971 aaKnown RBP19.37■□□□□ 0.69
SHISA4-201ENST00000362011 OR4N5Q8IXE1 308 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 DEFB107AQ8IZN7 70 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 LRRC25Q8N386 305 aaPredicted RBP19.37■□□□□ 0.69
SHISA4-201ENST00000362011 GOT1L1Q8NHS2 421 aaPredicted RBP19.37■□□□□ 0.69
SHISA4-201ENST00000362011 ANKRD9Q96BM1 317 aaPredicted RBP19.37■□□□□ 0.69
SHISA4-201ENST00000362011 AMDHD1Q96NU7 426 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 HOPXQ9BPY8 73 aaPredicted RBP19.37■□□□□ 0.69
SHISA4-201ENST00000362011 GLIPR2Q9H4G4 154 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 LANCL2Q9NS86 450 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 SLC22A11Q9NSA0 550 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 TAS2R9Q9NYW1 312 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 SLAMF8Q9P0V8 285 aa19.37■□□□□ 0.69
SHISA4-201ENST00000362011 IFT80Q9P2H3 777 aaPredicted RBP19.37■□□□□ 0.69
SHISA4-201ENST00000362011 SETXQ7Z333 2677 aaKnown RBP19.37■□□□□ 0.69
SHISA4-201ENST00000362011 PTPRQQ9UMZ3 2332 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 IGLV3-12A0A075B6K2 115 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 NVLO15381 856 aaKnown RBP19.36■□□□□ 0.69
SHISA4-201ENST00000362011 JRKO75564 520 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 CDC123O75794 336 aaPredicted RBP19.36■□□□□ 0.69
SHISA4-201ENST00000362011 STK17BO94768 372 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 ABCB1P08183 1280 aaPredicted RBP19.36■□□□□ 0.69
SHISA4-201ENST00000362011 PORP16435 677 aaPredicted RBP19.36■□□□□ 0.69
SHISA4-201ENST00000362011 PSME3P61289 254 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 HBA1P69905 142 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 ID2Q02363 134 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 OCA2Q04671 838 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 DUSP2Q05923 314 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 HSPB3Q12988 150 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 CAPRIN1Q14444 709 aaKnown RBP19.36■□□□□ 0.69
SHISA4-201ENST00000362011 ZNF750Q32MQ0 723 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 MFSD4BQ5TF39 518 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 C8orf82Q6P1X6 216 aaPredicted RBP19.36■□□□□ 0.69
SHISA4-201ENST00000362011 LRRC69Q6ZNQ3 347 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 ZNF621Q6ZSS3 439 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 ASRGL1Q7L266 308 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 OVCH1Q7RTY7 1134 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 ZNF551Q7Z340 670 aaPredicted RBP19.36■□□□□ 0.69
SHISA4-201ENST00000362011 CCDC116Q8IYX3 515 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 FKBP10Q96AY3 582 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 CGREF1Q99674 301 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 TGIF2Q9GZN2 237 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 NEUROD4Q9HD90 331 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 C14orf105Q9NVL8 296 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 CTSFQ9UBX1 484 aa19.36■□□□□ 0.69
SHISA4-201ENST00000362011 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.36■□□□□ 0.69
SHISA4-201ENST00000362011 GPN3Q9UHW5 284 aaPredicted RBP19.36■□□□□ 0.69
SHISA4-201ENST00000362011 C15orf38-AP3S2A0A0A6YYH1 394 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 A0A1W2PS29 197 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 C9orf172C9J069 976 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 RRP8O43159 456 aaKnown RBP19.35■□□□□ 0.69
SHISA4-201ENST00000362011 GSNP06396 782 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 ZCCHC18P0CG32 403 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 CPMP14384 443 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 HOXB9P17482 250 aaPredicted RBP19.35■□□□□ 0.69
SHISA4-201ENST00000362011 GPC1P35052 558 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 BTG2P78543 158 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 IGLV3-21P80748 117 aaPredicted RBP19.35■□□□□ 0.69
SHISA4-201ENST00000362011 STX4Q12846 297 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 GTDC1Q4AE62 458 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 VWA2Q5GFL6 755 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 QSOX2Q6ZRP7 698 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 ARPINQ7Z6K5 226 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 SCUBE1Q8IWY4 988 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 TRIML2Q8N7C3 387 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 GALNT6Q8NCL4 622 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 SUN3Q8TAQ9 357 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 MR1Q95460 341 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 PHF12Q96QT6 1004 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 GPATCH1Q9BRR8 931 aaKnown RBP19.35■□□□□ 0.69
SHISA4-201ENST00000362011 SLC39A3Q9BRY0 314 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 B3GNT4Q9C0J1 378 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 VAPAQ9P0L0 249 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 PCDHB14Q9Y5E9 798 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 PCDHGA8Q9Y5G5 932 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 PCDHGA7Q9Y5G6 932 aa19.35■□□□□ 0.69
SHISA4-201ENST00000362011 AK5Q9Y6K8 562 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms