RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 OR5H6Q8NGV6 325 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF480Q8WV37 535 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SLC5A11Q8WWX8 675 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ING5Q8WYH8 240 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CASD1Q96PB1 797 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR2A14Q96R47 310 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 EFCAB11Q9BUY7 163 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ABCG4Q9H172 646 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 RHBGQ9H310 441 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 EGLN3Q9H6Z9 239 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF224Q9NZL3 707 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 EXTL2Q9UBQ6 330 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 MGAT4BQ9UQ53 548 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 BRCA1P38398 1863 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PCM1Q15154 2024 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SH3D21A4FU49 640 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 H3BQ06 376 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 TMEM189-UBE2V1I3L0A0 370 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 RFXAPO00287 272 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 POP7O75817 140 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 VNN2O95498 520 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZDHHC11BP0C7U3 371 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 IL1RNP18510 177 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 HLA-FP30511 346 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 NTSP30990 170 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SLC6A12P48065 614 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SLC9A3P48764 834 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 NCBP2P52298 156 aaKnown RBP eCLIP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 RAB14P61106 215 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SP140Q13342 867 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 E2F2Q14209 437 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 WDR53Q7Z5U6 358 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ABI3BPQ7Z7G0 1075 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 KLBQ86Z14 1044 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR10H4Q8NGA5 316 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR51G2Q8NGK0 314 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF671Q8TAW3 534 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SLC7A6Q92536 515 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF558Q96NG5 402 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR4K3Q96R72 315 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 C17orf62Q9BQA9 187 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 BHLHE41Q9C0J9 482 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CLEC4MQ9H2X3 399 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CXorf36Q9H7Y0 433 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 HHATLQ9HCP6 504 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 IMP3Q9NV31 184 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 KLHL28Q9NXS3 571 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 TBC1D24Q9ULP9 559 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ING4Q9UNL4 249 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 INSL5Q9Y5Q6 135 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 TDRD15B5MCY1 1934 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 FAM183AA6NL82 134 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 WASHC1A8K0Z3 465 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 RNASET2O00584 256 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PRKYO43930 277 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ADAMTS4O75173 837 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 FCER2P06734 321 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CXCR2P25025 360 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 RGS8P57771 180 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SLC3A1Q07837 685 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 RBBP4Q09028 425 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 MTAPQ13126 283 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 GRIN2CQ14957 1233 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 KLHL22Q53GT1 634 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SLC30A6Q6NXT4 461 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 WASH2PQ6VEQ5 465 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PLEKHM3Q6ZWE6 761 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CCDC190Q86UF4 302 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 DNAJC5GQ8N7S2 189 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 RASGEF1AQ8N9B8 481 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR7G1Q8NGA0 311 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR4F15Q8NGB8 312 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SLC38A5Q8WUX1 472 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 GLYATL1Q969I3 302 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 TIFAQ96CG3 184 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 TTLL2Q9BWV7 592 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 GALNT9Q9HCQ5 603 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CXXC1Q9P0U4 656 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 WNT6Q9Y6F9 365 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 TSC2P49815 1807 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 MYOFQ9NZM1 2061 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 RALGAPA2Q2PPJ7 1873 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CENPBD1B2RD01 187 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 LEFTY2O00292 366 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PITPNM1O00562 1244 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PRKRAO75569 313 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SEMA3DO95025 777 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 DHFRP00374 187 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 FGBP02675 491 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SCG5P05408 212 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 MRPL3P09001 348 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 VIPR1P32241 457 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 GPR4P46093 362 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SMSP52788 366 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CTBP2P56545 445 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PSPHP78330 225 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 MAB21L1Q13394 359 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 IRF3Q14653 427 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms