RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 GPR162Q16538 588 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 FAM110CQ1W6H9 321 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 HIST2H3PS2Q5TEC6 136 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM234Q8WY98 164 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 KCNC2Q96PR1 638 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 RGPD8O14715 1765 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 A0A0G2JLW4 131 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 UNC119BA6NIH7 251 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 HSPB2A8KAH6 182 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 DPM1O60762 260 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 RAD51DO75771 328 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 NKX6-1P78426 367 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TAP2Q03519 686 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CRHR2Q13324 411 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 HSPB2Q16082 182 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 KIAA1324Q6UXG2 1013 aaKnown RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 FAM151BQ6UXP7 276 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF565Q8N9K5 539 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 DCAF4L2Q8NA75 395 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 GTPBP3Q969Y2 492 aaKnown RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CDK15Q96Q40 435 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 DNTTIP1Q9H147 329 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZDHHC6Q9H6R6 413 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 MEIOCA2RUB1 952 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 LY86O95711 162 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 HBE1P02100 147 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 THEGLP0DJG4 465 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 PIPP12273 146 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 GPR19Q15760 415 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 OR56A3Q8NH54 315 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TBATAQ96M53 351 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 MTERF1Q99551 399 aaKnown RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CACNG2Q9Y698 323 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CEPT1Q9Y6K0 416 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM200CA6NKL6 621 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SMARCD3Q6STE5 483 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SAPCD2Q86UD0 394 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 C10orf90Q96M02 699 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 NPLQ9BXD5 320 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF700Q9H0M5 742 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 FZD8Q9H461 694 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CRTAC1Q9NQ79 661 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CDK14O94921 469 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZBTB7AO95365 584 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 EPHX2P34913 555 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CA5AP35218 305 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 NKX3-2P78367 333 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 NIPAL4Q0D2K0 466 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SYT6Q5T7P8 510 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TMIGD1Q6UXZ0 262 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 C7orf61Q8IZ16 206 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 GPC2Q8N158 579 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 LINC00116Q8NCU8 138 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SSX3Q99909 188 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 GAL3ST1Q99999 423 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ACTR10Q9NZ32 417 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 WIF1Q9Y5W5 379 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ERAL1O75616 437 aaKnown RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 NCBP2P52298 156 aaKnown RBP eCLIP6.3□□□□□ -1.42e-6■■■□□ 17.1
VPS13B-202ENST00000357162 BHLHE41Q9C0J9 482 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TP63Q9H3D4 680 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SCML2Q9UQR0 700 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 OR51F1A6NGY5 319 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 UBFD1O14562 309 aaKnown RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 B4GALT5O43286 388 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CA12O43570 354 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 APBB3O95704 486 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SLC35E2BP0CK96 405 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CELP19835 753 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 PAX6P26367 422 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ATXN1P54253 815 aaKnown RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CEACAM7Q14002 265 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 UBE2NLQ5JXB2 153 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 PDSS1Q5T2R2 415 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 FAM83HQ6ZRV2 1179 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 LDB1Q86U70 411 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SLC51BQ86UW2 128 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 IQCHQ86VS3 1027 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 COMMD7Q86VX2 200 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 B3GNT7Q8NFL0 401 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CDKN2AIPNLQ96HQ2 116 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 NLE1Q9NVX2 485 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CASTOR2A6NHX0 329 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF736B4DX44 427 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ANKRD66B4E2M5 251 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 GABARAPO95166 117 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CD1EP15812 388 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 FDXRP22570 491 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF460Q14592 562 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 RNASE10Q5GAN6 216 aaKnown RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TRAPPC12Q8WVT3 735 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF559Q9BR84 538 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 PRELID3BQ9Y3B1 194 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 IGLV3-22A0A075B6J6 115 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM150CB9EJG8 249 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 hCG_2039718K7EN88 272 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF821O75541 412 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CTSHP09668 335 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TACR2P21452 398 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms