RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ACVR1BP36896 505 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 NAA10P41227 235 aaPredicted RBP14.21□□□□□ -0.13
CHD4-201ENST00000357008 PGGT1BP53609 377 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 SLC22A10Q63ZE4 541 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 TLDC1Q6P9B6 456 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 ISCA2Q86U28 154 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 WASF3Q9UPY6 502 aa14.21□□□□□ -0.13
CHD4-201ENST00000357008 SCAMP2O15127 329 aaKnown RBP14.21□□□□□ -0.14
CHD4-201ENST00000357008 UCHL1P09936 223 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 AGXTP21549 392 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 OPRL1P41146 370 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 ETV4P43268 484 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 MTNR1AP48039 350 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 SLC11A1P49279 550 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 NKX2-5P52952 324 aaPredicted RBP14.21□□□□□ -0.14
CHD4-201ENST00000357008 PRKCZQ05513 592 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 ITPRIPL2Q3MIP1 535 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 CHRFAM7AQ494W8 412 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 GDPGP1Q6ZNW5 385 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 VWA5B2Q8N398 1253 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 OR10T2Q8NGX3 314 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 ZNF778Q96MU6 729 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 OR10A4Q9H209 315 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 OR2S2Q9NQN1 319 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 ZDHHC7Q9NXF8 308 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 PRODH2Q9UF12 536 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 DPP6P42658 865 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 KCNC1P48547 511 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 GNMTQ14749 295 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 CHFRQ96EP1 664 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 PCTPQ9UKL6 214 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 ERVK-19Q9WJR5 959 aa14.21□□□□□ -0.14
CHD4-201ENST00000357008 INHAP05111 366 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ASGR2P07307 311 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 CHMP24386 653 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ID2Q02363 134 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 SNTA1Q13424 505 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ZNF280BQ86YH2 543 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 OR52P1PQ8NH57 321 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 DEDD2Q8WXF8 326 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 SLC6A7Q99884 636 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 SDR39U1Q9NRG7 319 aaPredicted RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 INSL5Q9Y5Q6 135 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 WNT6Q9Y6F9 365 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 GOLGA4Q13439 2230 aaKnown RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 ZNF705EA8MWA4 302 aaPredicted RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 MECP2P51608 486 aaKnown RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 GPR143P51810 404 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 SIAH1Q8IUQ4 282 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 MAPK15Q8TD08 544 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 SLA2Q9H6Q3 261 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 TAS2R8Q9NYW2 309 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 TMEM181Q9P2C4 612 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 EPHA6Q9UF33 1036 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 C1orf226A1L170 272 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 MITFO75030 526 aaPredicted RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 PFKLP17858 780 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 CBLP22681 906 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 FIP1L1Q6UN15 594 aaKnown RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 DTX3Q8N9I9 347 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 FBXO27Q8NI29 283 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 SCAMP4Q969E2 229 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 FMO6PO60774 539 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 UPK1BO75841 260 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ARHGEF15O94989 841 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 PIM1P11309 404 aaPredicted RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 AK4P27144 223 aaPredicted RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 GMPRP36959 345 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 OC90Q02509 493 aaPredicted RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 TBC1D25Q3MII6 688 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ANKRD54Q6NXT1 300 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ARHGAP11AQ6P4F7 1023 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ELP5Q8TE02 316 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 SETD7Q8WTS6 366 aaKnown RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 TMEM88BA6NKF7 163 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 C9J4A7 227 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 M0R129 80 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 CAPN3P20807 821 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ADH6P28332 368 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 GABRA3P34903 492 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ZNF41P51814 821 aaPredicted RBP14.2□□□□□ -0.14
CHD4-201ENST00000357008 TLE2Q04725 743 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ARHGAP40Q5TG30 622 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 SLC5A8Q8N695 610 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 ZNF709Q8N972 641 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 IGSF8Q969P0 613 aa14.2□□□□□ -0.14
CHD4-201ENST00000357008 LEFTY2O00292 366 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 CSTAP01040 98 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 DRD2P14416 443 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 ARSDP51689 593 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 CDK5R2Q13319 367 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 CDNFQ49AH0 187 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 LRIF1Q5T3J3 769 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 OR52N2Q8NGI0 321 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 FRS2Q8WU20 508 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 NECAB3Q96P71 396 aaPredicted RBP14.19□□□□□ -0.14
CHD4-201ENST00000357008 RAD9AQ99638 391 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 URM1Q9BTM9 101 aaKnown RBP14.19□□□□□ -0.14
CHD4-201ENST00000357008 METTL7AQ9H8H3 244 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 GXYLT2A0PJZ3 443 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms