RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 KDELR3O43731 214 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 PRAMEF11O60813 436 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 SLC22A5O76082 557 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 IFNA4P05014 189 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 ERCC1P07992 297 aaPredicted RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 AGXTP21549 392 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 RAB5CP51148 216 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 SPCS2Q15005 226 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 MS4A13Q5J8X5 152 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 CES4AQ5XG92 561 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 SLC5A8Q8N695 610 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 SUN3Q8TAQ9 357 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 PRMT8Q9NR22 394 aaPredicted RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 RPH3AQ9Y2J0 694 aaPredicted RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 STYXL1Q9Y6J8 313 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 ARHGEF15O94989 841 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 S1PR4O95977 384 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 OXTRP30559 389 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 MRPS10P82664 201 aaKnown RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 EMX1Q04741 257 aaPredicted RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 MPP7Q5T2T1 576 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZNF550Q7Z398 422 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 CLDN19Q8N6F1 224 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 PMEPA1Q969W9 287 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 DGAT2Q96PD7 388 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 URM1Q9BTM9 101 aaKnown RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZDHHC4Q9NPG8 344 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 GMDSO60547 372 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 VIPR1P32241 457 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 SOX9P48436 509 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 MICAQ29983 383 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 SVBPQ8N300 66 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 KCT2Q8NC54 265 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 MAPK15Q8TD08 544 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR2M2Q96R28 347 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 TTTY10Q9BZA0 68 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 RPS10P5Q9NQ39 176 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 HIF3AQ9Y2N7 669 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 DCCP43146 1447 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 A0A1W2PPK0 400 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 CLDN7O95471 211 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 FDXRP22570 491 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 BCL7AQ4VC05 210 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 TIGD5Q53EQ6 642 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 ALG10BQ5I7T1 473 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZNF648Q5T619 568 aaPredicted RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 FAM217AQ8IXS0 508 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 TBC1D15Q8TC07 691 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 C16orf58Q96GQ5 468 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 SSX3Q99909 188 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR51E2Q9H255 320 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 PCDHGA8Q9Y5G5 932 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 A0A1W2PQ09 198 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 IFNA10P01566 189 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 GBAP04062 536 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 CDK1P06493 297 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 CDK2P24941 298 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 PTH2RP49190 550 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 BTN1A1Q13410 526 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZNF674Q2M3X9 581 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 METTL4Q8N3J2 472 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 TEX26Q8N6G2 289 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZFP41Q8N8Y5 198 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 RTP4Q96DX8 246 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 HS6ST2Q96MM7 605 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 THAP7Q9BT49 309 aaPredicted RBP12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 CXCL14O95715 111 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 LAG3P18627 525 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 MAGEA11P43364 429 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 ARHGAP11AQ6P4F7 1023 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 DTWD1Q8N5C7 304 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 ARL14EPQ8N8R7 260 aaPredicted RBP12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR1J4Q8NGS1 313 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR9A1PQ8NGU1 263 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 POLDIP3Q9BY77 421 aaKnown RBP12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 SLIT2O94813 1529 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 GPR89AB7ZAQ6 455 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 JRKO75564 520 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 GPR89BP0CG08 455 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 HLA-EP13747 358 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 ALDH3B1P43353 468 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 MAGEA6P43360 314 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 LSSP48449 732 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 TAGLNQ01995 201 aaKnown RBP12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 GRM2Q14416 872 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 TATDN3Q17R31 274 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 TBC1D25Q3MII6 688 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 FAM124AQ86V42 546 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR2AP1Q8NGE2 309 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR14C36Q8NHC7 312 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 CNN2Q99439 309 aaKnown RBP12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 MROQ9BYG7 248 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 INPPL1O15357 1258 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 NUPL2O15504 423 aaKnown RBP12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR12D1P0DN82 309 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 SSX2Q16385 188 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 PGAP1Q75T13 922 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 C3orf49Q96BT1 292 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 UQCC2Q9BRT2 126 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 CNOT2Q9NZN8 540 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms