RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 OR51I1Q9H343 314 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 ENOPH1Q9UHY7 261 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 MOSPD1Q9UJG1 213 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 ICKQ9UPZ9 632 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 KLK4Q9Y5K2 254 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 PEX16Q9Y5Y5 336 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 C17orf113A0A1B0GUU1 675 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 PRAMEF27A3QJZ7 478 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 RPS19P39019 145 aaKnown RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 VASPP50552 380 aaPredicted RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 CCR8P51685 355 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 ZNF45Q02386 682 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 KCNJ8Q15842 424 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 ATAD3BQ5T9A4 648 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 LIPKQ5VXJ0 399 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 APOBEC4Q8WW27 367 aaKnown RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 ANKRA2Q9H9E1 313 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 HHATLQ9HCP6 504 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 ZCCHC3Q9NUD5 404 aaKnown RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 FGF19O95750 216 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 P2RY2P41231 377 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 ELAVL3Q14576 367 aaKnown RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 ERN2Q76MJ5 926 aaKnown RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 HCAR2Q8TDS4 363 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 TRMT61AQ96FX7 289 aaKnown RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 TSSK6Q9BXA6 273 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 POLR2J2Q9GZM3 115 aaKnown RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 CCDC59Q9P031 241 aaKnown RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 KCND3Q9UK17 655 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 GPR34Q9UPC5 381 aa18.53■□□□□ 0.56
COL13A1-201ENST00000354547 GPC6Q9Y625 555 aaPredicted RBP18.53■□□□□ 0.56
COL13A1-201ENST00000354547 EDDM13A0A1B0GTR0 161 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 SH3D21A4FU49 640 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 NDUFS4O43181 175 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 MPZL2O60487 215 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 CSO75390 466 aaKnown RBP18.52■□□□□ 0.56
COL13A1-201ENST00000354547 UGT2B17O75795 530 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 ADAP00813 363 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 HOXB3P14651 431 aaPredicted RBP18.52■□□□□ 0.56
COL13A1-201ENST00000354547 BUD31P41223 144 aaPredicted RBP18.52■□□□□ 0.56
COL13A1-201ENST00000354547 SSR2P43308 183 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 PGBD2Q6P3X8 592 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 GDPD3Q7L5L3 318 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 C9orf43Q8TAL5 461 aaPredicted RBP18.52■□□□□ 0.56
COL13A1-201ENST00000354547 KLHL6Q8WZ60 621 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 FERD3LQ96RJ6 166 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 SP140LQ9H930 580 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 MARCH7Q9H992 704 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 IMP3Q9NV31 184 aaKnown RBP18.52■□□□□ 0.56
COL13A1-201ENST00000354547 ISPDA4D126 451 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 CARNS1A5YM72 827 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 LRRTM2O43300 516 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 RB1P06400 928 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 SPHARQ15513 63 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 GPR19Q15760 415 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 AKAP14Q86UN6 197 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 ZNF607Q96SK3 696 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 CPNE5Q9HCH3 593 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 A4GALTQ9NPC4 353 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 WDR70Q9NW82 654 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 CNOT2Q9NZN8 540 aaKnown RBP18.52■□□□□ 0.56
COL13A1-201ENST00000354547 WDR37Q9Y2I8 494 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 INSL6Q9Y581 213 aa18.52■□□□□ 0.56
COL13A1-201ENST00000354547 HAT1O14929 419 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 KMOO15229 486 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 VEGFDO43915 354 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 NTN1O95631 604 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 ACP5P13686 325 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 ZNF91Q05481 1191 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 PRKCDQ05655 676 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 ZMAT1Q5H9K5 638 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 TUBA3EQ6PEY2 450 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 PODNL1Q6PEZ8 512 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 LRRTM4Q86VH4 590 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 IQCHQ86VS3 1027 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 NUDT13Q86X67 352 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 Q8N9G6 341 aaPredicted RBP18.52■□□□□ 0.55
COL13A1-201ENST00000354547 SPPL3Q8TCT6 385 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 ZBED6CLQ96FA7 236 aaPredicted RBP18.52■□□□□ 0.55
COL13A1-201ENST00000354547 LINC00615Q96LM1 132 aaPredicted RBP18.52■□□□□ 0.55
COL13A1-201ENST00000354547 ZNF354BQ96LW1 612 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 DPH7Q9BTV6 452 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 NXF2Q9GZY0 626 aaKnown RBP18.52■□□□□ 0.55
COL13A1-201ENST00000354547 KLHL31Q9H511 634 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 CARD8Q9Y2G2 431 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 TSC22D4Q9Y3Q8 395 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 REV3LO60673 3130 aa18.52■□□□□ 0.55
COL13A1-201ENST00000354547 PDZK1P1A8MUH7 402 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 A8MVJ9 347 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 FRS3O43559 492 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 PRKYO43930 277 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 PTNP21246 168 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 TNFSF8P32971 234 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 GJA8P48165 433 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 KCNJ5P48544 419 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 TIMM50Q3ZCQ8 353 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 OR5K2Q8NHB8 316 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 WFIKKN2Q8TEU8 576 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 SUSD6Q92537 303 aa18.51■□□□□ 0.55
COL13A1-201ENST00000354547 TMEM80Q96HE8 168 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms