RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZNF416Q9BWM5 594 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 OR6C2Q9NZP2 312 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 CPNE7Q9UBL6 633 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TNFRSF10DQ9UBN6 386 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 FTSJ1Q9UET6 329 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ZFR2Q9UPR6 939 aaKnown RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 CACNG2Q9Y698 323 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ENPP4Q9Y6X5 453 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 DOCK1Q14185 1865 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 RLFQ13129 1914 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 RPS10-NUDT3A0A1W2PQS6 291 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 LANCL1O43813 399 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ATG13O75143 517 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ELK1P19419 428 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 XPAP23025 273 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 SLC6A4P31645 630 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 RPS24P62847 133 aaKnown RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 PUDPQ08623 228 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 GINS1Q14691 196 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 PCBP1Q15365 356 aaKnown RBP eCLIP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 HSD17B12Q53GQ0 312 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 NDUFAF5Q5TEU4 345 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ANXA8L1Q5VT79 327 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 RAET1GQ6H3X3 334 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TAPT1Q6NXT6 567 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 LINC00518Q8N0U6 118 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 CHCHD4Q8N4Q1 142 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TRPV1Q8NER1 839 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 OR7G3Q8NG95 312 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 OR10Z1Q8NGY1 313 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 NARS2Q96I59 477 aaKnown RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF578Q96N58 590 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TMEM175Q9BSA9 504 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 CACNG6Q9BXT2 260 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TM6SF2Q9BZW4 377 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 METTL17Q9H7H0 456 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 SCPEP1Q9HB40 452 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 DIMT1Q9UNQ2 313 aaKnown RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 C2orf78A6NCI8 922 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TMEM88BA6NKF7 163 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 L7N2F9 121 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 PRKYO43930 277 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 NME6O75414 186 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 PRAMEF12O95522 483 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 IGHA2P01877 340 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ALDOBP05062 364 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 RHOCP08134 193 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 CD3GP09693 182 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 CPEP16870 476 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 BPIP17213 487 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 F8A1P23610 371 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 SOX18P35713 384 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 CCR6P51684 374 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 KIAA1024LP59773 190 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 BTG1P62324 171 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF33BQ06732 778 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 PCDH1Q08174 1060 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TRIM40Q6P9F5 258 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 KIAA0907Q7Z7F0 614 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TOMM5Q8N4H5 51 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ASZ1Q8WWH4 475 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TADA1Q96BN2 335 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 FOPNLQ96NB1 174 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 SLC25A19Q9HC21 320 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 IMP3Q9NV31 184 aaKnown RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF282Q9UDV7 671 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ANGPT4Q9Y264 503 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 RUVBL1Q9Y265 456 aaKnown RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 FKBP7Q9Y680 259 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ARL5CA6NH57 179 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 M0QZ92 97 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SAP18O00422 153 aaKnown RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SEPT4O43236 478 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 B4GALT3O60512 393 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 GCM2O75603 506 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 RHCEP18577 417 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 EPORP19235 508 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 TYMPP19971 482 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 TACR2P21452 398 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ARHGDIBP52566 201 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CTAG1AP78358 180 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 RIN1Q13671 783 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 GRIN2CQ14957 1233 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SHEQ5VZ18 495 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ALKAL2Q6UX46 152 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CERS6Q6ZMG9 384 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MSANTD1Q6ZTZ1 278 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 APOBEC3FQ8IUX4 373 aaKnown RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 KLHDC9Q8NEP7 349 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 OR8D4Q8NGM9 314 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MRPS31Q92665 395 aaKnown RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SAMD11Q96NU1 681 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 FAM193BQ96PV7 902 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ATF6BQ99941 703 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 P2RY13Q9BPV8 354 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MCOLN1Q9GZU1 580 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 P2RY12Q9H244 342 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 HEXA-AS1Q9H8Q6 139 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 BRD7Q9NPI1 651 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms