RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 ANGPT2O15123 496 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 PRICKLE3O43900 615 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-204ENST00000348259 MED26O95402 600 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 IL6P05231 212 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 BCKDHAP12694 445 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 CAPN3P20807 821 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 AGAP20933 346 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 MST1P26927 711 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 GSTM2P28161 218 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 SHMT2P34897 504 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 NEK2P51955 445 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 CLNS1AP54105 237 aaKnown RBP9.13□□□□□ -0.95
MRPL55-204ENST00000348259 CLDN8P56748 225 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 PSME3P61289 254 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 RPL38P63173 70 aaKnown RBP9.13□□□□□ -0.95
MRPL55-204ENST00000348259 PHEXP78562 749 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 ABATP80404 500 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 PRDX1Q06830 199 aaKnown RBP9.13□□□□□ -0.95
MRPL55-204ENST00000348259 SPIN4Q56A73 249 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 SGO1Q5FBB7 561 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 PIGGQ5H8A4 983 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 MSANTD1Q6ZTZ1 278 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 RETREG3Q86VR2 466 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 C17orf64Q86WR6 236 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 FAM20CQ8IXL6 584 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 KRT78Q8N1N4 520 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 HUS1BQ8NHY5 278 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 CHTF18Q8WVB6 975 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-204ENST00000348259 TESCQ96BS2 214 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 TEX37Q96LM6 180 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 ZBTB18Q99592 522 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 NPAS2Q99743 824 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 C1orf50Q9BV19 199 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 SARGQ9BW04 601 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 EPS8L2Q9H6S3 715 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 DCLRE1BQ9H816 532 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 OR6C2Q9NZP2 312 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 ABI3Q9P2A4 366 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 CTSFQ9UBX1 484 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 BCAP29Q9UHQ4 241 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 LEF1Q9UJU2 399 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-204ENST00000348259 PLCL2Q9UPR0 1127 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 RUVBL1Q9Y265 456 aaKnown RBP9.13□□□□□ -0.95
MRPL55-204ENST00000348259 TDRKHQ9Y2W6 561 aaKnown RBP9.13□□□□□ -0.95
MRPL55-204ENST00000348259 ACANP16112 2415 aa9.13□□□□□ -0.95
MRPL55-204ENST00000348259 HEATR5BQ9P2D3 2071 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 HCFC1P51610 2035 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 CCDC154A6NI56 674 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 NR5A2O00482 541 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 CFLARO15519 480 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 MAP3K7O43318 606 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 CCNDBP1O95273 360 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 HPP00738 406 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 PRPS1L1P21108 318 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 PTX3P26022 381 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-204ENST00000348259 IL12AP29459 219 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 CCR8P51685 355 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 SLBPQ14493 270 aaKnown RBP eCLIP9.12□□□□□ -0.95
MRPL55-204ENST00000348259 KIR2DS3Q14952 304 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 SNCBQ16143 134 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 DPY19L1Q2PZI1 675 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 VPS26BQ4G0F5 336 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 CATSPEREQ5SY80 951 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 THEMIS2Q5TEJ8 643 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 YOD1Q5VVQ6 348 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-204ENST00000348259 NOXRED1Q6NXP6 359 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 SUSD1Q6UWL2 747 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 TMIGD1Q6UXZ0 262 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 RPTNQ6XPR3 784 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 TMPRSS11BQ86T26 416 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 RIMKLAQ8IXN7 391 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 LIX1Q8N485 282 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 DTWD1Q8N5C7 304 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 LINC01555Q8NAE3 123 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 OR2A1Q8NGT9 310 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 JADE3Q92613 823 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 HAS2Q92819 552 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 MTFMTQ96DP5 389 aaKnown RBP9.12□□□□□ -0.95
MRPL55-204ENST00000348259 C14orf79Q96F83 325 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 THOC3Q96J01 351 aaKnown RBP9.12□□□□□ -0.95
MRPL55-204ENST00000348259 IL17FQ96PD4 163 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 CDRT15Q96T59 188 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 HBEGFQ99075 208 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 AIF1LQ9BQI0 150 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 DPY30Q9C005 99 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 SPAG4Q9NPE6 437 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 SEMA3GQ9NS98 782 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 TMEM181Q9P2C4 612 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 ABCD2Q9UBJ2 740 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 CD300AQ9UGN4 299 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 CIDEBQ9UHD4 219 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 NXT1Q9UKK6 140 aaKnown RBP9.12□□□□□ -0.95
MRPL55-204ENST00000348259 WBP11Q9Y2W2 641 aaKnown RBP9.12□□□□□ -0.95
MRPL55-204ENST00000348259 MRPS2Q9Y399 296 aaKnown RBP9.12□□□□□ -0.95
MRPL55-204ENST00000348259 POLR3HQ9Y535 204 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-204ENST00000348259 KLK4Q9Y5K2 254 aa9.12□□□□□ -0.95
MRPL55-204ENST00000348259 C15orf38-AP3S2A0A0A6YYH1 394 aa9.11□□□□□ -0.95
MRPL55-204ENST00000348259 TRAV17A0A0B4J275 112 aa9.11□□□□□ -0.95
MRPL55-204ENST00000348259 ASPDHA6ND91 283 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms